Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02558 ATGGAAATCTTTCCTTCTCAGAGTCGCAGGAACTTCTCGTCTTCCTCCAACGATGCCGTTTCTGTTACCACCATTCCCCTCTATCGCTCTGCGCCCTCACTCGAAGTTAGGCTCGAGGAGTTTGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCGCGGGGGAAAAAACCGGAAGAAATGGAAAATTTGGTAAAGAAGCTTTTGAAAGTGAATATGAGACATCAACACGCATCTGAGGCTCTGAACAAGGATATTATATCTCATTTTGTTCTACGTCTTGTGTATTGCAGAACCGAGGATTTGAGGAAATGGTTTCTTTCCATGGAATCTGCGCTCTTTCGCTATCGCTTTCGTCTTCTGAATGCTGAAGCTCAGAGGGCAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAGGAGAAATTGGTACAAGTTGCACGCTCAATGGGTCAGCCTTCACCTACTGGTGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCCGAGCTTGTGGCTGGGCGGAAAGTATTAATTAATCAAGGATATGCATACGTTGCAATGAATCAGATTGTTTCACTCGTGGCCACACTATTCCGCAGTCAGCTATCAAAGACACTCATTCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAACATAGGTTGACTCCTATTGTGGAAGGCCTGTGCTCTAGTTATCTGGGTCCTGACTATTCTCAGTCAAGAGAATATGCTGATATATCACTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAATTTGGATGATGCACTTGCGTTTTGGAGGGCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAGTACGCATATGGCATACGTCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGCCCAAAGATTATCTCATCGACTCCTGGAACGGGAGATCATCATGGTTGCCCCTATCGACATTTCAGCGAGGAGAATCTAAGAGCTGCTCTCGGCAGAATGGGGGTAAACAGTCGAGCTATGGAGGATGTGATAGATAAAGCGAGAAATAGACATTATCAGTTGGCTTGTACCTTGACATTTGAAGCCCTTCATGGCATACCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTAAAAAGATATTGCAGTCAAAGCAAAAGGATTCTTCAGCCTAG 1377 0.4386 MEIFPSQSRRNFSSSSNDAVSVTTIPLYRSAPSLEVRLEEFESFAIDRLRVLKGISDGMSRGKKPEEMENLVKKLLKVNMRHQHASEALNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMEEFDLPYRAVSNVEFESIKEKLVQVARSMGQPSPTGDAIFYKVPFEEVPELVAGRKVLINQGYAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEGLCSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKQYAYGIRHNYGKEGKRTDYTPYSCPKIISSTPGTGDHHGCPYRHFSEENLRAALGRMGVNSRAMEDVIDKARNRHYQLACTLTFEALHGIPCDAGINHPNQYFSDSKKILQSKQKDSSA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02558 458 PIRSF DNA_primase_large 3 458 IPR016558 -
Lapu3g02558 458 PANTHER DNA PRIMASE LARGE SUBUNIT 20 454 IPR007238 GO:0006269
Lapu3g02558 458 Gene3D - 4 250 - -
Lapu3g02558 458 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Lapu3g02558 458 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
Lapu3g02558 458 FunFam DNA primase large subunit 6 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02558 1 452 Core DNA Replication Machinery Family AT1G67320 67.008 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02558 K02685 - gmx:100806321 826.624