Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02524 ATGGCTTCAACAATCTCCTTCACCCTGTTCTTCCTCTGCTTCTCTTCCTTTCATTTCTCGATCTTTTCATCGCAATCAACCCATCCATTCCCCAAAGAAGCCCTCCCCACCAAGTATGGTTACCTTCCAATCGCCCCTACTTCCACTTCTGCAATTTACTACACCTTCTATGAAGCCCACAACTCCACTTTGCCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGGTAACTTCTATGAGCTTGGACCCTGGCACGTCACCCGATCCCTCACCCTTCAGCGCAACCCTGCTTCTTGGAACAGGATTTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGATCTGGCTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAAAGATCAAAACGCCGTTGCCAAACACCTCTTTGCTGCTATAACCAATCCACTTCTTAATAATCTTCTTTTCCAACATCGCCCGATTTATATTACTGGAGAAAGCTATGCTGGCAAGTATGTACCTGCAATTGGGTACTATATATTGAAGAAAAACGCAAACTTGGGGGCTTCCGAAAGAGTGAATTTGGCTGGTGTAGCTATTGGGGATGGGTTAACTGACCCCGAAACTCAAGTTCTCACTCATGCTGTGAATGCTTATTACGCTGGATTGATCAATGAGAGGCAGAAGAATGAGTTGGAAAAAGTTCAATTGGAAGCAGTTGGGTTGACCCAAATGAGGAATTGGAGTAAAGCAACTGATGCGAGAAACAAAGTGTTGAGAATGTTGCAAGACATGACAGGGTTGGCTACTTTGTATGACTACACAAAGAAGGCTCCGTACGAGGATGATTTTGTGGAACGATTCTTGAACATTGCGGAGGTGAAGAAGGCCTTGGGGGTGAACGAATCGTTTGTGTATGAGATATGTAGTGATGTTGTTGGGAAGGCATTACATGGTGATGTGATGAAAAGTGTGAAACATATGGTGGAATACTTGGTGAGGAGGAGCAGGGTGTTGCTGTATCAAGGTGAGTATGATTTGAGGGATGGTGTGGTCCAAACAGAGGCGTGGGTGAAGACAATGAAATGGGAAGGGACAGTGGAGTTTCTGAATGCCGAAAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGGTATGTACAAAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGAGAGCGGGTCATCTTTTGCCTACTGATCAGCCTCTTAATTCTCAAGCTATGATTGAAGATTGGGTTTTGGAAAGGGTGGCTGGTCTTGAGTGTGAATCAAGGTCTCTAGCTGTTGACAATGAAGTAACTCCTATGTTCAGGTTAATAGGCACCCTTAATTCATCAAGTCTAACCCTCCCTATCATACCATGTTACGCTTGTGTCATGGCTCCGTATTCTTTGCTTGAGTTACTCATACCAACTGCATTTTTTTTGTGTCGCCATACAAAGGTTCAATATGCTCATGTTGATCTCCTCTCAGTACAGAACACAGTTGATCAACACTTACGAAAGTTTAAATAG 1551 0.4475 MASTISFTLFFLCFSSFHFSIFSSQSTHPFPKEALPTKYGYLPIAPTSTSAIYYTFYEAHNSTLPLSQTPLLIWLQGGPGCSSMLGNFYELGPWHVTRSLTLQRNPASWNRIFGLLFLDSPIGSGFSVASTPEEIPKDQNAVAKHLFAAITNPLLNNLLFQHRPIYITGESYAGKYVPAIGYYILKKNANLGASERVNLAGVAIGDGLTDPETQVLTHAVNAYYAGLINERQKNELEKVQLEAVGLTQMRNWSKATDARNKVLRMLQDMTGLATLYDYTKKAPYEDDFVERFLNIAEVKKALGVNESFVYEICSDVVGKALHGDVMKSVKHMVEYLVRRSRVLLYQGEYDLRDGVVQTEAWVKTMKWEGTVEFLNAERKIWKVNGELAGYVQNWKSLTNVVVLRAGHLLPTDQPLNSQAMIEDWVLERVAGLECESRSLAVDNEVTPMFRLIGTLNSSSLTLPIIPCYACVMAPYSLLELLIPTAFFLCRHTKVQYAHVDLLSVQNTVDQHLRKFK* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02524 516 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 414 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 SUPERFAMILY alpha/beta-Hydrolases 37 425 IPR029058 -
Lapu3g02524 516 ProSitePatterns Serine carboxypeptidases, serine active site. 167 174 IPR018202 GO:0004185
Lapu3g02524 516 Gene3D alpha/beta hydrolase 19 433 IPR029058 -
Lapu3g02524 516 FunFam Carboxypeptidase 21 432 - -
Lapu3g02524 516 Pfam Serine carboxypeptidase 36 425 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 397 410 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 117 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 128 IPR001563 GO:0004185|GO:0006508
Lapu3g02524 516 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02524 Lapu-Chr3 47309166 47313391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02524 292 425 Calmodulin-binding Proteins AT2G22960 18.657 2.29e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02524 K09645 - gmx:100780822 704.901