Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02522 ATGGCTATCATCAACAAGCTCACACGGTCAAACACTAACATGGCTTCAACAATCTCCTTCACCCTGTTCTTCCTCTGCTTCTCTTCCTTTCATTTCTCGATCTTTTCATCGCAATCAACCCATCCATTCCCCAAAGAAGCCCTCCCCACCAAGTATGGTTACCTTCCAATCGCCCCTACTTCCTCTTCTGCAATTTACTACACCTTCTATGAAGCCCACAACTCCACTTTGCCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGTTGCTCCTCCATGCTTGGTAACTTCTATGAGCTTGGACCCTGGCAGGTCACCCGATCCCTCACCCTTCAGCGCAACCCTGCTTCTTGGAACAGGATTTTCGGCCTTCTTTTTCTTGATAGTCCCATTGGATCTGGCTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAAAGATCAAAACGCCGTTGCCAAACACCTCTTTGCTGCTATAACCAAGTTTCTTCAACTTTATCCTCTTTTCCAACATCGCCCGATTTATATTACTGGAGAAAGCTATGCTGGCAAGTATGTACCTGCAATTGGGTACTATATATTGAAGAAAAACGCAAACTTGGAGGCTTCCGAAAGAGTGAATTTGGCTGGTGTAGCTATTGGGGATGGGTTAACTGACCCCGAAACTCAAGTTCTCACTCATGCTGTGAATGCTTATTACTCTGGATTGATCAATGAGAGGCAGAAGAATGAGTTGGAAAAAGTTCAATTGGAAGCAGTTGGGTTGACCCAAATGAGGAATTGGAGTAAAGCAACTGATGCGAGAAACAAAGTGTTGAGAATGTTGCAAGACATGACAGGGTTGGCTACTTTGTATGACTACACAAAGAAGGCTCCGTACGAGGATGATTTGGTGGAACGATTCTTGAACATTGCGGAGGTGAAGAAGGCCTTGGGGGTGAACGAATCGTTTGTGTATGAGATATGTAGTGATGTTGTTGGGAAGGCATTACATGGTGATGTGATGAAAAGTGTGAAACATGTGGTGGAATACTTGGTGAGGAGGAGCAGGGTGTTGCTGTATCAAGGTGAGTATGATTTGAGGGATGGTGTGGTCCAAACAGAGGCGTGGGTGAAGACAATGAAATGGGAAGGGACAGTGGAGTTTCTGAATGCCGAAAGGAAGATATGGAAGGTGAATGGAGAGCTTTCTGGGTATGTACAAAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGAGAGCTGGTCATCTTTTGCCTACTGATCAGCCTCTTAATTCTCAAGCTATGATTGAAGATTGGGTTTTGGAAAGGGGTATCTTTAAAAACTTCCACAAGGCAAATGCTTCAAGTAAGTCTATATTTGTTGAGTAA 1383 0.449 MAIINKLTRSNTNMASTISFTLFFLCFSSFHFSIFSSQSTHPFPKEALPTKYGYLPIAPTSSSAIYYTFYEAHNSTLPLSQTPLLIWLQGGPGCSSMLGNFYELGPWQVTRSLTLQRNPASWNRIFGLLFLDSPIGSGFSVASTPEEIPKDQNAVAKHLFAAITKFLQLYPLFQHRPIYITGESYAGKYVPAIGYYILKKNANLEASERVNLAGVAIGDGLTDPETQVLTHAVNAYYSGLINERQKNELEKVQLEAVGLTQMRNWSKATDARNKVLRMLQDMTGLATLYDYTKKAPYEDDLVERFLNIAEVKKALGVNESFVYEICSDVVGKALHGDVMKSVKHVVEYLVRRSRVLLYQGEYDLRDGVVQTEAWVKTMKWEGTVEFLNAERKIWKVNGELSGYVQNWKSLTNVVVLRAGHLLPTDQPLNSQAMIEDWVLERGIFKNFHKANASSKSIFVE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02522 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 427 IPR001563 GO:0004185|GO:0006508
Lapu3g02522 460 FunFam Carboxypeptidase 34 445 - -
Lapu3g02522 460 Gene3D alpha/beta hydrolase 31 450 IPR029058 -
Lapu3g02522 460 SUPERFAMILY alpha/beta-Hydrolases 50 438 IPR029058 -
Lapu3g02522 460 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Lapu3g02522 460 Coils Coil 242 262 - -
Lapu3g02522 460 Pfam Serine carboxypeptidase 49 438 IPR001563 GO:0004185|GO:0006508
Lapu3g02522 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lapu3g02522 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lapu3g02522 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 410 423 IPR001563 GO:0004185|GO:0006508
Lapu3g02522 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02522 Lapu-Chr3 47297993 47299945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02522 301 438 Calmodulin-binding Proteins AT2G22960 17.391 5.24e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02522 K09645 - gmx:100780822 736.873