Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02521 ATGGTGTTGAGTTCAATTTGTGTCACATGGTCATTCTGGTGGTCGGACTCCGCCAACTTGCATCAATTTCTAACCTTTCTACTCACTCTCATCAGTGTGCTATGTTTGCTACGGTGGTTCAGGAATTCAACCGATGAAGCATCACCTTTGCCTCCAGGTCCTCTGGGTTTTCCATTTCTTGGGTACCTTCCCTTTCTAGGAACCCATCCCCACCTCAAATTTCACAAGCTTGCACAACTTTATGGACCTATCTACAAGCTCGTGTTGGGAACCAAAACACTAGTGGTGGTTAGTTCACCCTCTCTGGTGAAACAGATAGTGCGTGACCAAGACACCATATTTGCCAACCGTGACCCTCTCATTTCTGCATTGGTTGCCTTGTATGGTGGCACTGACATAGCCTCTTTGCCTCACGGTCCACAGTGGAGGAAGGCTCGCAAGATATTGGTAAGTGAGATGCTCAGCAGCACCAACATCACTAACTCTTTTTCTCATAGGAGAGTGGAGGTTAACAAATCCATCAAAGATGTGTATGAAAAGAAAATTGGGTGCCCCATATGTATTGGCGAGTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGTATGATTTGGGGTGAGACGTTGCGAGGGGAAGAAGGGGCTGCTATTGGGGTTGAGTTTAGAGCCTTTGTGTCAGAACTTATGGTGTTACTAGGGAAGCCAAATGTTTCGGATCTTTACCCCACACTAGCTCGGTTAGATTTACAAGGAATTGAGAGAAGAACCAGAAAGGTCTCCCAATGGATTGATAGGCTCTTTGATTCTGCCATTCAAAAGAGAATGAATCTGACTGAGAAGGGAGAAAATAAGTCAAAGAAAGATTTCCTGCAATATCTATTGGAGCTTACAAAGAGTGGCGATGAGTCAGCGTCAATGACCATGAAGGAGATCAAAGCCATCCTCATAGATATAGTGGTGGGTGGAACCGAGACCACATCAACAACCATGGAATGGGTGGTAGCGAGGCTGTTGCAGCATCCTGAGAAAATGAATAGAGTTCATGAAGAGATGGATACTGTGATAGGATTGGACAACTCTATTGAATTAGAATCCCAATTGTCCAAATTACAGTACTTAGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCTCCTCTCCCCTTTTTGGTACCTCGTTGCCCAAGTCAAACTAGCACTGTTGGTGGATATACCATTCCAAAAGGCGCACAAGTAATGTTGAACGTGTGGACTATACACAGAGACCCTGACATTTGGGAAGATGCATTAGAATTTCGACCAGAGAGGTTTCTGACTGATGATGGCAAGTTGGATTACTGGGGCAACAAATTTGAGTTTCTTCCTTTTGGGTCTGGAAGAAGAATCTGTGCAGGCCTACCTCTTGCTGAGAAGATGATAATGTTCATGCTAGCTTCCTTCTTGCATTCTTTTGAGTGGAGATTACCCAGTGGAACAGTGCTTGAATTTTCAGATAAATTTGGCGTTGTGGTCAAGAAAATGAAGCCTCTAGTTGTTATTCCAAAGCCTAGACTATCTAAACCAGAACTCTACAAATAA 1578 0.4373 MVLSSICVTWSFWWSDSANLHQFLTFLLTLISVLCLLRWFRNSTDEASPLPPGPLGFPFLGYLPFLGTHPHLKFHKLAQLYGPIYKLVLGTKTLVVVSSPSLVKQIVRDQDTIFANRDPLISALVALYGGTDIASLPHGPQWRKARKILVSEMLSSTNITNSFSHRRVEVNKSIKDVYEKKIGCPICIGELAFLTATNAIMSMIWGETLRGEEGAAIGVEFRAFVSELMVLLGKPNVSDLYPTLARLDLQGIERRTRKVSQWIDRLFDSAIQKRMNLTEKGENKSKKDFLQYLLELTKSGDESASMTMKEIKAILIDIVVGGTETTSTTMEWVVARLLQHPEKMNRVHEEMDTVIGLDNSIELESQLSKLQYLEAVIKETLRLHPPLPFLVPRCPSQTSTVGGYTIPKGAQVMLNVWTIHRDPDIWEDALEFRPERFLTDDGKLDYWGNKFEFLPFGSGRRICAGLPLAEKMIMFMLASFLHSFEWRLPSGTVLEFSDKFGVVVKKMKPLVVIPKPRLSKPELYK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02521 525 CDD CYP76-like 78 514 - -
Lapu3g02521 525 Gene3D Cytochrome P450 35 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 SUPERFAMILY Cytochrome P450 51 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PANTHER OS08G0547900 PROTEIN 11 525 - -
Lapu3g02521 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Lapu3g02521 525 FunFam Predicted protein 319 512 - -
Lapu3g02521 525 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02521 525 Pfam Cytochrome P450 51 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02521 Lapu-Chr3 47289904 47292981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02521 27 524 Cytochrome P450 AT4G12320 45.509 1.90e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02521 - - gmx:100785686 872.078