Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02506 ATGGGAACAACAAGCAAAACCATCTTCTCATCCATTTTACTCTGCTCACTCCTACTTCACCTTTATTTTTCCGAAGGGATAGCAGAAGAGGTGGCAAAGTCCGAAAGCGAAGCATTAGGGGAACCAGAGAAAAGAGAAGCATTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTCCCCTGCCTCCCCTGAAACTCCATGCCCCCCTCCCCCACCCAAACCACTCTCCCGTTTAGAAAAAGCACGTCGCGTGCTTCTCAAATTCAAAACCCTCATCGATGACCCAACGTGTTACACGCAAAACTGGAACGAGAACACTGGCACGTGTGACTTCAACGGGGTACGATGCGCCATATATCCGAATTCAAACGAGCAAGCAGTTGCCGGACTGGACTTAAATGGAGCAAGACTGAAGGGTCTAAAGGGGTGCGATTTGCCCCTCACATCTCTCTTGGGCGTGAACCAAATCCCTGAGTTGACATTCTTCCACGTGAACTCCAATGGCTTCGACGGTTTTGTCCCCACCGAAATCACCAAGTTCCCTTTCTTCTTCGAACTGGACCTGAGTAACAACAAAATCCAAGGCAAGTTTCCCCTGGACGCGATCACGAAAGACATCCTAGTCTTCCTCGACCTCCGCTTCAACCAACTCACCGGACCAATTCCCCCCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCAGTTCACACAGTGCCTCCCTCAGAATTTCGGCTCCACACCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCTCCATTCCCCAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACAAGTTCGACGGCTGCTTGCCCTTTGAAATTGGAAACCTTAAAAAAGCTGTGGTCTTTGATGTGAGTAAGAATTTACTCACCGGCCCCATCCCTCTCTCCTTCGGGTGCTTGAAGAGCATTCAGTATCTCAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACGTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTGTCCTTGGCCGACAATTACTTCAACCAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAAGAATTGCATCCAAGGGCTCCCAAACCAAAGGTCGCCCAAAGAATGCAGCGAGTTTTACAAGACGAAGAAGACGTGTCCTAATCCCGGTTCTTTCTACTACGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTACAAAACCACTGGTCCACCTTCTGAGCCGGTGACTTACAAGACTCTCAAACCGCATCGTTTGAGATTGTGA 1356 0.4978 MGTTSKTIFSSILLCSLLLHLYFSEGIAEEVAKSESEALGEPEKREALEIIIGGGGSPAPSPASPETPCPPPPPKPLSRLEKARRVLLKFKTLIDDPTCYTQNWNENTGTCDFNGVRCAIYPNSNEQAVAGLDLNGARLKGLKGCDLPLTSLLGVNQIPELTFFHVNSNGFDGFVPTEITKFPFFFELDLSNNKIQGKFPLDAITKDILVFLDLRFNQLTGPIPPQLFQKDLDVIFINNNQFTQCLPQNFGSTPARYLTFANNNLTGSIPQSVGYAPNLTEVLFLGNKFDGCLPFEIGNLKKAVVFDVSKNLLTGPIPLSFGCLKSIQYLNLANNKFYGCVPDNVCQIPSLRNNGNLSLADNYFNQLGPSCWSLIKSKVLDVSKNCIQGLPNQRSPKECSEFYKTKKTCPNPGSFYYVPCKSHWGKPSYKTTGPPSEPVTYKTLKPHRLRL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02506 451 Gene3D Ribonuclease Inhibitor 80 254 IPR032675 -
Lapu3g02506 451 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 38 433 - -
Lapu3g02506 451 Pfam Leucine rich repeat N-terminal domain 83 118 IPR013210 -
Lapu3g02506 451 MobiDBLite consensus disorder prediction 61 77 - -
Lapu3g02506 451 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 344 - -
Lapu3g02506 451 MobiDBLite consensus disorder prediction 52 78 - -
Lapu3g02506 451 SUPERFAMILY L domain-like 82 389 - -
Lapu3g02506 451 Coils Coil 448 451 - -
Lapu3g02506 451 Gene3D Ribonuclease Inhibitor 255 408 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02506 Lapu-Chr3 47050492 47052107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02506 79 435 Trihelix Transcription Factor Family AT1G12040 39.394 1.22e-73 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02506 - - gmx:100796207 655.981