Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02505 ATGATTTTATCTAAGCAATCTTCAGTTTCAACACTCCACACCTTAACATTTTTTCTTTGCCTTCTCTCAGTAGGTTGCCAAATCCTTGAAACCCCGTCACCACCAGCGGATTCAATCCCACTAATCCCTGACATTTTAAACTTCATAGACCAGAGACTCGCTCTGGTCTTCCCCATTATTCAAGCCTTCAAGAACACAATAACCTCGGATCCTTTGGGAATAACAGCAACATGGGTTGGTCCAAATATATGCAACTACACAGGTTTCTACTGTGACAGCCCTCCAGACAACCTCACTGCCACAACCATTGCCTCAATTGATTTCAATGGCTTTCAACTCACTGCTCCAACTCTTGATGGCTTCATCGACCAACTCCCTGATCTGGCTCTTTTCCATGCAAACAGCAACAAATTTTCGGGCATAATATCGCCGAAAATATCGGGACTCAAGTTCTTGTACGAACTTGATTTAAGTAACAACTTGTTCTCTGGGTTATTCCCCACATCGGTCATCAACATCCCCACCTTGTCCTTTCTGGACATTAGGTACAACTTTTTCACAGGCGCAGTACCCCCCCAAATTTTCATGCAGACACTAGACGTTCTTTTCCTCAACAACAACAATTTCATGCTCACACTACCCAACAACCTAGGTGACACACCCGTCGTTTATCTCACGTTGGCCAACAACAAATTCACCGGGCCCATTCCCCGAAGCATTGGAAAAGCCTCGTCCACACTGATCGAAGTGCTGCTTGTGAACAACCTTTTAACGGGTTGTCTTCCCTACGACATCGGGTTCTTGGGAAACGTGACATTGTTCGATGTTGGTGGGAACCTCTTAACTGGGCCAATACCTTGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTGGCAAGGAACTTTTTGTATGGACAGGTTCCGGAAGTGGTGTGTGCGCTGGGGAATTTGGCGAATCTTTCCTTGTCTTACAATTATTTTACGAAAGTGGGACCCTTGTGCAAGAAGCTGATTCAAAGAGGGGTTCTTGATGTGAGGAAGAACTGTATTATTGGTCTTCCGGATCAGAGATCGATGAAAGAGTGCACCGCGTTTTTCTTGATTCCTAGGTCTTGTTCGCACCCTGCGTCGTTTAACATCATACCGTGCCAAATTCATTGGACGAAACCGCTAGAGATAACTAAGAGGAATTTGCTTTCATATTCTGCTCTTTCCAGAAATAGAGTGGTTTTGTAA 1242 0.4493 MILSKQSSVSTLHTLTFFLCLLSVGCQILETPSPPADSIPLIPDILNFIDQRLALVFPIIQAFKNTITSDPLGITATWVGPNICNYTGFYCDSPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNKFSGIISPKISGLKFLYELDLSNNLFSGLFPTSVINIPTLSFLDIRYNFFTGAVPPQIFMQTLDVLFLNNNNFMLTLPNNLGDTPVVYLTLANNKFTGPIPRSIGKASSTLIEVLLVNNLLTGCLPYDIGFLGNVTLFDVGGNLLTGPIPWSFGCLKKVEQLNLARNFLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKKLIQRGVLDVRKNCIIGLPDQRSMKECTAFFLIPRSCSHPASFNIIPCQIHWTKPLEITKRNLLSYSALSRNRVVL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02505 413 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lapu3g02505 413 SUPERFAMILY L domain-like 63 355 - -
Lapu3g02505 413 Gene3D Ribonuclease Inhibitor 59 220 IPR032675 -
Lapu3g02505 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 387 - -
Lapu3g02505 413 Gene3D Ribonuclease Inhibitor 221 412 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02505 Lapu-Chr3 47042580 47044173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02505 48 371 Leucine-rich Repeat extension Gene Families AT3G24480 47.222 3.82e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02505 - - gmx:100813314 711.064