Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02481 ATGAACTTTAGGAACTACGATGATAATAACCCCACTTGGGATGCCATGCACGGGAAGACACCAGCAAATGTTGGCTCTCTGCTGAGACAATCATCGGTGTACTCCCTTACTTTTGATGAATTTCAGAGCACAATGGGTGGGGTTGGGAAAGAATTTGGGTCCATGAACATGGACGAACTCTTAAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCAGCTGGTACAGGAGAAGGTCACAACCATAACCCAGTTAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGGCCAAAGATGGGAGTGGCAATGGTGGTTCATCCATTCCTCAGAGGCAACCAACATTGGGAGAAATGACTTTGGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTTCCTCAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTGACTTCCCTAGACCAAACAATAACAATGGCCTACTTCTTGGGTTCCAACAACCAAATAGAAGTAATGGGAATTTGGGTGAGAGGGTGGTGGAGAGCAACAATAACATAGCTCCCAAACAACCTCCTCCTTTATCACTAAACTCAAACCACTCTCAACGACCAACACAACAGCCGCCACCACTTTTTCCGAAGCCAGCAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAACACTGCTCCACTTGCTAGCCCTGGCAGAAGAGGAGGGTTGATTGAGCATTCATTGAATGTTGGAATGGTTGGTTTAGCCTCGGGTAATCCAGGTGCTTCTCCCTCAAGGAAAATATCACCAGATGTAATTACAAGATGTAATGTAGAAAACTCTCCACTGTCGCCAGTTCATTATGCAATCAACAGGGGAAGGAAATGCAGTGCGATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCCAGGTCGCGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTGCAAAGAAAACAGGCAGAAATTAAGGAAATGCAGAAAAATAAGGATTCGGACCCTGCATGCCAGCCAAGGGTAAGTAAAATACAATGCTTGAGAAGGACACTTACAGGACCATGGTAG 1221 0.4455 MNFRNYDDNNPTWDAMHGKTPANVGSLLRQSSVYSLTFDEFQSTMGGVGKEFGSMNMDELLKNIWTAEETQALAFSAGTGEGHNHNPVSGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGAKDGSGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQIGKPNNNGWFGDFPRPNNNNGLLLGFQQPNRSNGNLGERVVESNNNIAPKQPPPLSLNSNHSQRPTQQPPPLFPKPANVAFAAPMHLLNTAPLASPGRRGGLIEHSLNVGMVGLASGNPGASPSRKISPDVITRCNVENSPLSPVHYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKDSDPACQPRVSKIQCLRRTLTGPW* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02481 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 377 IPR004827 GO:0003700|GO:0006355
Lapu3g02481 406 SMART brlzneu 324 388 IPR004827 GO:0003700|GO:0006355
Lapu3g02481 406 MobiDBLite consensus disorder prediction 126 140 - -
Lapu3g02481 406 Coils Coil 351 381 - -
Lapu3g02481 406 MobiDBLite consensus disorder prediction 208 240 - -
Lapu3g02481 406 Pfam bZIP transcription factor 328 381 IPR004827 GO:0003700|GO:0006355
Lapu3g02481 406 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 326 383 - -
Lapu3g02481 406 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 406 IPR043452 GO:0003700|GO:0045893
Lapu3g02481 406 CDD bZIP_plant_BZIP46 328 382 - -
Lapu3g02481 406 MobiDBLite consensus disorder prediction 118 142 - -
Lapu3g02481 406 SUPERFAMILY Leucine zipper domain 328 376 IPR046347 GO:0003700|GO:0006355
Lapu3g02481 406 Gene3D - 326 384 - -
Lapu3g02481 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Lapu3g02481 406 MobiDBLite consensus disorder prediction 208 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02481 Lapu-Chr3 46770369 46774576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02481 27 406 bZIP Transcription Factor Family AT1G49720 48.635 5.26e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g02481 bZIP_1 2.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02481 K14432 - gmx:100776600 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02481 3 46770369 46774576 Lapu3g02481 3 46770369 46774576 ECH