LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g02437	ATGGCATCAGATACCCAATCACCACCTCTCGAGATATTAGTTCGAGGACCCGAACAATTCTCTCTCTGGACCGGACCCCCCTTCGCCGCCGACGGTCAACCCGCCGTCAAGCTTGACAAAGTTAACTGCCTCAATGCCAAGTTCAGCGACGATGGATCCAAACTCATGGTCACCAAATCCAACTCGCTCATTACTGTGTACGATTGCAACACTGCTAAAGAGATTAGAGCTTTTGAAGTTCCCAATGTCCTTGCCGCTACCTTGTCGCCCTTTGGAACTTACTTGCAAACCTTTCAGAAACCTTCGGCGCCGCAGGAGAAGAACGTTACGCTGTGGAAAATCGACACCGGTGCTCCTGTTTACCAACAGTCCCAGAAGAACATGACAAAAGGCAATTGGCCTGCGATTCAGTTTAGTTCTGATGAAGCTACTGCGTGTCGGTTGGCAACTAATGAGGTGCAATTTTTTGACACTGGGGATTTTTCTAAAGGAGTTATCATTCGGTTAAGAGTTCCGGGGGTTGCTGCTGCTGAGCTTTCTAGTTTACCGGGGTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGCGTTCCTGCCAGTGTACAGATATTTGCTAGTGGAAATGCGTCTCAAAGTCAACCTATTGCTCGACGTAGTTTTTTCCGATGTTCAACCACCCAACTTAAATGGAATCACGGATCAACTGGGCTTTTAGTGGTGGTGCAGTCGGATGTTGACAAAACTAATCAGAGTTACTATGGAGAATCAAAATTATGCTATTTGACTACAGATGGAATGCATGAAGGACTTGTGCCTCTCCGGAAGGATGGGCCTATTCATGACGCTCAGTGGTCATACTCTGGCTTGGAATTTGCTGTTGTGTATGGATTCATGCCTGCTAAAGCAACTCTGTTCGACAAGAAGTGCAATCCTCTTCTTGAGCTTGGAACTGGTCCTTACAACACTATTCGTTGGAACCCAAAAGGGAAATTTTTGTGTTTGGCTGGCTTTGGTAACTTGCCTGGTGATATGGTATTCTGGGATTACATAGATAAAAAGCAACTTGGAACCACTAAAGCTGAATGGTCTGTGACTAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCTACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCCAGAAAGTTTGGTGATATTTCTGAATTAATTAAGACTCTAAATTTGGTACAACTTGAAGATAAAAAACCATCAGGTCAAGGACCACCAAAGTCAACCCAGACTTCTGTAAAAGCCTCTTCTGCCAATCCCCCGGCACAAAAGCCTGCTGCGTATCGTCCACCACATGCTAAGAGTGCCGCTGCTATTCAGGCACAGTTGTTCGGAGAGACTCCTGCAGAATCAATGAGCAAGAATGCGTTACGAAACAAAAAAAAGAGGGAAAAACAGAAGGAGAAAAAGGCTGCTCCTGATGGCAGTTCTTCCTAA	1560	0.4532	MASDTQSPPLEILVRGPEQFSLWTGPPFAADGQPAVKLDKVNCLNAKFSDDGSKLMVTKSNSLITVYDCNTAKEIRAFEVPNVLAATLSPFGTYLQTFQKPSAPQEKNVTLWKIDTGAPVYQQSQKNMTKGNWPAIQFSSDEATACRLATNEVQFFDTGDFSKGVIIRLRVPGVAAAELSSLPGSHVAAFVPESKGVPASVQIFASGNASQSQPIARRSFFRCSTTQLKWNHGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPRKFGDISELIKTLNLVQLEDKKPSGQGPPKSTQTSVKASSANPPAQKPAAYRPPHAKSAAAIQAQLFGETPAESMSKNALRNKKKREKQKEKKAAPDGSSS*	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g02437	519	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 2A	10	512	IPR011387	GO:0003743\|GO:0006413
	Lapu3g02437	519	Gene3D	-	29	189	IPR015943	GO:0005515
	Lapu3g02437	519	FunFam	Eukaryotic translation initiation factor 2A	200	423	-	-
	Lapu3g02437	519	FunFam	Eukaryotic translation initiation factor 2A	31	186	-	-
	Lapu3g02437	519	PIRSF	Transl_init_eIF2A	4	519	IPR011387	GO:0003743\|GO:0006413
	Lapu3g02437	519	MobiDBLite	consensus disorder prediction	444	460	-	-
	Lapu3g02437	519	Gene3D	-	198	399	IPR015943	GO:0005515
	Lapu3g02437	519	MobiDBLite	consensus disorder prediction	437	519	-	-
	Lapu3g02437	519	SUPERFAMILY	DPP6 N-terminal domain-like	43	396	-	-
	Lapu3g02437	519	Pfam	Eukaryotic translation initiation factor eIF2A	218	411	IPR013979	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g02437	69	418	Eukaryotic Initiation Factors Gene Family	AT5G27640	23.483	6.39e-20	91.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g02437	K15026		-	gmx:100811589	973