Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02415 ATGTCTACACTTCTCAACATTCTTCTCTTGTTTCTCACGTTTTCTTACTCTTCTTCTTCTTCAACCCACCCTCGCCGTGTCCTTCACCAACCACTCTTCCCCAGAATCTCTTTTCCCCCAACACAACCTCCAGCTTTATCCCCTCAACCCCAAAAACAACACCATTTGCCCAAGTTTCCATTTTCTTCTTCTTCATCGTCGCCGCCACCGCCGCAAAAGCCTTTCTTCCCTTCTTACCATTCCCCTCCACTTCCTCCTTCCCCCACCGTCGTTGCCACTTTTCCCGCTAACATCTCCTCCCTCCTCCTCCCCCGCCCCTACTCCCACCACCACCGCTCCGCCGCCGCCCTCGCCATCTCCCTCTCCCTCTTCTCCCTCACCGTTCTCGTCGCCGCTGCCTTCTTCCTCCTCCACCGCCGCCGTGCTCATGGGACTTCCTCCTCCACCGCCACCCATGAAGACGATGACAAAGCCTCGAGATCCGACAGCCGCCACCTGTTCCCACCGAACACTGCCACCTCCGATGGTGCCGATAGAAAAACCCGCGGAAAGTCCTCCCCGACCTCGGAGCTACTATACCTCGGCACGGTAGCAAACTCGGTGAACTCAACACTTGACACAAGCTCCAGCCACCATAACGACGGTTTCCGGCCACCGTATCAAAAACTCGGTGACTCGCCGGAACTGAACCCTCTTCCACCTTTGCCACGTCACAAACCATGGATGGATAAAGATGACGATAATAACAATGTGGAAGAAAAAGTGGAACAACACGAAGAGGAAGAAGAAGAATTACAGGTACAAGAAGAAGAAGACGAAGAACAGTTTTTTTCTCCAAGAGGTTCTTCTGGTGGGAACAAACAACATAGTCATCCTTCTCCTTCTGCCATTGCTGCTTCAAGTTCACGCGTGTTCCACGTGGATAATAAATTTGGTTCTACAAGCTTCAATTCTCGAACCCCTTCGTACCCTCGTTCCAATTCGCTCTCTTTCTCTCGTTCCCCATCTCTGAATTTCAGTCCCGCAAGTGTTAAATCGCTTCCTCCGAACAACCCTGCTTCTCCTTCTTTCTCTTCATCATCTTCTTCTCCCAGGGAACAATGGCATGTTCCTTCAAGCGACAAAGATTCTCCGGCAAGATATTTACCTCCTCCACCTCCGCCGCCACCTCCACCACGGCGAATTTGGGAAGCTCCGGTTTCTGTTAGGAAAGAGAATGAGGAGACCCCGAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAATTCAGACAGAGTCATGGTTTGGGATCAGTTGAGACCCAATTCTTTTCAGTTGAACGAGGACATGATTGAAACTCTTTTCATGGTAAATAATTCCAAGGAGGCTTTTGGAGTTGCTATTAGAGATAATGCTCGGCGCCACATAGTTCATTCTGCTTCTCCCATGCCCCTGGAGAATAGGGTGCTTGATCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCTCTCAATGTTACTATTGACGAAGTTTGTGATGCCCTCAGAGAAGGCAATTGTGATTCCTTAGGAACAGAACTTCTTGAAAGTTTATTGAAGATGGCTCCAACTAAAGATGAAGAATCAAAGCTAAAGGAATTTCAAGATGAATCACCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTCAAAGTTGTGCTTGATATACCTTTCGCTTTTAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAAAAAGTCCTTTGAAACTCTGGAGGTGGCCTGTGAGGAATTAAAGAATAGTCGAATGTTTTTGAAGATACTAGAAGCAGTGTTGAGAACAGGAAATAGAATGAATGTTGGCACCAATCGTGGTGATGCGCATGCGTTCAAACTGGACACACTTTTGAAATTAGTTGATATTAAAGGAACTGATGGAAAGACTTCTCTTTTGCATTTTGTTATACAGGAACTCGTCAGAACCGAGGGTTCTCATATTTCTGGTTCTAAACATCACCATGCCCCTGATAATGTCCACCAATATAGTATCCAAGATGAGGTTGACTTTAAAAAGATCGGCTTGCAAGTTGTTTCAGGATTGAGTGGGGAGCTCACCAATGTTAAAAAAGCAGCTGCTATGGATTCAGACATGCTCAGTAATGATGTTGCCAAACTTGCCAGAGGAATTGATAAAGTTGTGCAAGTTGTGAAATTGAATGAAGAGTCACCTTTGAAAGAAACTAATCAAAAGTTCTCTGAAGCAATGAAAGGATTCTTGGAAAGGGGAGAGCAAGAGATTTCAACAATCCAGGCCCAAGAGAAAAAAGGTCTGTCTTCTGTGAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTCAGAATTTTTATGGTCCTCAGGGATTTCCTTTATATTCTAGATGGAGTTTGCAAGGAAGTTGGTAAAGTGAATGAGAGAACTTTGATTGGTTCCCGTCATTCTGTAATGCCTGCAAATCCTATAATGCAAACTTTTTTTCCTGAGATTATTGGTAAGGAACCATCTGATTCCTCTGAATCTGATTAA 2595 0.4528 MSTLLNILLLFLTFSYSSSSSTHPRRVLHQPLFPRISFPPTQPPALSPQPQKQHHLPKFPFSSSSSSPPPPQKPFFPSYHSPPLPPSPTVVATFPANISSLLLPRPYSHHHRSAAALAISLSLFSLTVLVAAAFFLLHRRRAHGTSSSTATHEDDDKASRSDSRHLFPPNTATSDGADRKTRGKSSPTSELLYLGTVANSVNSTLDTSSSHHNDGFRPPYQKLGDSPELNPLPPLPRHKPWMDKDDDNNNVEEKVEQHEEEEEELQVQEEEDEEQFFSPRGSSGGNKQHSHPSPSAIAASSSRVFHVDNKFGSTSFNSRTPSYPRSNSLSFSRSPSLNFSPASVKSLPPNNPASPSFSSSSSSPREQWHVPSSDKDSPARYLPPPPPPPPPPRRIWEAPVSVRKENEETPKPKLKALHWDKVKANSDRVMVWDQLRPNSFQLNEDMIETLFMVNNSKEAFGVAIRDNARRHIVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDSLGTELLESLLKMAPTKDEESKLKEFQDESPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELKNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTSLLHFVIQELVRTEGSHISGSKHHHAPDNVHQYSIQDEVDFKKIGLQVVSGLSGELTNVKKAAAMDSDMLSNDVAKLARGIDKVVQVVKLNEESPLKETNQKFSEAMKGFLERGEQEISTIQAQEKKGLSSVKEITEYFHGNSAKEEAHPFRIFMVLRDFLYILDGVCKEVGKVNERTLIGSRHSVMPANPIMQTFFPEIIGKEPSDSSESD* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02415 864 SUPERFAMILY Formin homology 2 domain (FH2 domain) 383 829 - -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 39 81 - -
Lapu3g02415 864 Gene3D Formin, FH2 domain 399 827 IPR042201 -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 204 396 - -
Lapu3g02415 864 PANTHER FORMIN-RELATED 12 850 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu3g02415 864 Coils Coil 241 275 - -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 378 396 - -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 146 163 - -
Lapu3g02415 864 ProSiteProfiles Formin homology-2 (FH2) domain profile. 404 842 IPR015425 -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 279 368 - -
Lapu3g02415 864 Coils Coil 585 605 - -
Lapu3g02415 864 Pfam Formin Homology 2 Domain 406 815 IPR015425 -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 238 255 - -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 256 272 - -
Lapu3g02415 864 SMART it6_source 404 831 IPR015425 -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 63 81 - -
Lapu3g02415 864 MobiDBLite consensus disorder prediction 143 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02415 Lapu-Chr3 45821531 45825644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02415 400 855 FH2 protein (formin) Gene Family AT3G25500 63.974 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02415 - - vun:114175163 1333.16