Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02401 ATGGGTTCAGGTGATTGGTTTAGGACAATAATTAGCTCAAGAAAATCAAAAGAAGGCAGATCAAAGAAAGTAAAGACTAAGACTTATAGAGGGAAAAAGTCCAATGGTTTAGCAAATAACATTAAAAGCGAAGAGTCAGCTGGAGTATCAATTGAAAATATTGCTGCAACAAGGATCCAAACAGCATTCCGAGCTTATAAGGCTAGAAAATATTTACGTCGCTTGAGAGGATTCACAAAACTGAAAACCCTGACTCAAGGTTGCTCTGTTCAAAAACAAGCTAGTACAACTATAACTCATCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGCTCGCCGAATATGTATGGTGACCGAAGACAGGCTGAAGCGGAAGAAACTAAATTCTCAACTAAAACTGGAGACCAAGATTCATGAACTAGAGGTGGAATGGTGTGGTGGCTCTGAAACCATGGAGGAAATCATTGCTAGGTTACACCTAAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAACCATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTAGCCAAGGTCTAGGAAATTATGAACTTGGCAAAGCTAGTTGGAGTTGGAGCTGGAAGGACCGGTGGATTGCTGTGCGCCCTTGGGAAAGCCGTGTCCCCAGTAAAGATCAAAATAAGATGTCAAGCAAAGTTAAAAAGGATAAGAAATCATCAACGTCGAAAAAACCAGTTTCACTTAAAACTCCTTCAGCTAATGCTAAAGGGACTAAACCCTCAGGTAATGCAAAAGGGACTACTAAAGCTAGAAGAAAGTTGTCTTACCCTGCTCCAGAGAAAAAAACAGTTCAGGAAGGAAAGCAATGA 861 0.4135 MGSGDWFRTIISSRKSKEGRSKKVKTKTYRGKKSNGLANNIKSEESAGVSIENIAATRIQTAFRAYKARKYLRRLRGFTKLKTLTQGCSVQKQASTTITHLHSWSKIQAEIRARRICMVTEDRLKRKKLNSQLKLETKIHELEVEWCGGSETMEEIIARLHLREEAAVKRERTMAYAFSHQWRANSSQGLGNYELGKASWSWSWKDRWIAVRPWESRVPSKDQNKMSSKVKKDKKSSTSKKPVSLKTPSANAKGTKPSGNAKGTTKARRKLSYPAPEKKTVQEGKQ* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02401 286 PANTHER IQ-DOMAIN 5-RELATED 1 272 - -
Lapu3g02401 286 ProSiteProfiles IQ motif profile. 52 80 IPR000048 GO:0005515
Lapu3g02401 286 MobiDBLite consensus disorder prediction 217 286 - -
Lapu3g02401 286 MobiDBLite consensus disorder prediction 271 286 - -
Lapu3g02401 286 MobiDBLite consensus disorder prediction 241 262 - -
Lapu3g02401 286 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02401 Lapu-Chr3 45610176 45615323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02401 1 275 IQD Protein Family AT2G33990 50.000 1.98e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02401 - - gmx:100800675 427.943