Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02393 ATGTCTTCTTCCAATAAACACTGGCCAAGCATGTTCAAATCCAAGCCTTGCAATTCCCACAACCAATGGCAGCATGACAACAACTCTTCTGTCCTGTCTACCGGATGCCAAAGAAGCCCTTACACTTCAGGAAGTGAAGAGAGAACTCCAGAACCGAAGTCAAGATGGAACCCAAAACCCGAGCAAATTCGCATTCTAGAGGCCATCTTCAATTCTGGGATGGTGAATCCCCCAAGGGATGAGATAAGGAAGATCCGGGGGCAGTTGCAGGAGTATGGCCAAACCTACTTTCAGTCTCACAACAACACCAATTTGCTACCACCAGTAATTGAGTCTTTCTCCTTTCCTTTGCACAATAATGGTCAAGGTGTAATACTTAATAATACCATCACTACCCATGGCTTTTCTGTCCCTCAGTTCTCCAACAATATCATGCAATCTCAACCACTGTGTCAACCATATGCTGGACCTAGTAGTAGTCTTTTTCTCAACGAGATCATGAACCATGGAACCTTCTCAAAGAAAGATCAAGATCAGGAAAAGGCATTAAAACTAATGCACCGTCAACAACTTGGCTTCCCTCTGACTTCATCTTCAACCTCAACCCTTGTTCCCCCAGTCTCAACTGTTCCATGTCCAATCACCCAACTTCAAGGTGTTGGAGGTGAGGTTACAGCAAATACAGCAAAATGTATAGTTTTCATTAACGATGTTGCATTTGAGGTTATGATGGGACCCTTCAACGTGCGCCAAGCCTTTGGAGATGAAGCTGTGCTTGTCCACTCTTCCGGTCCTGTCCCCACCGATGAGTGGGGCATCACCCTCCACCCACTGCAGCATGGTGCTTACTATTATCTGATATAA 864 0.4537 MSSSNKHWPSMFKSKPCNSHNQWQHDNNSSVLSTGCQRSPYTSGSEERTPEPKSRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRGQLQEYGQTYFQSHNNTNLLPPVIESFSFPLHNNGQGVILNNTITTHGFSVPQFSNNIMQSQPLCQPYAGPSSSLFLNEIMNHGTFSKKDQDQEKALKLMHRQQLGFPLTSSSTSTLVPPVSTVPCPITQLQGVGGEVTANTAKCIVFINDVAFEVMMGPFNVRQAFGDEAVLVHSSGPVPTDEWGITLHPLQHGAYYYLI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02393 287 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 94 IPR044557 GO:0003700|GO:0050793
Lapu3g02393 287 MobiDBLite consensus disorder prediction 1 47 - -
Lapu3g02393 287 Pfam Homeodomain 53 90 IPR001356 GO:0003677
Lapu3g02393 287 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02393 Lapu-Chr3 45511203 45513103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02393 1 287 Wox Gene Family AT5G45980 37.685 2.02e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu3g02393 Homeodomain 4.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02393 - - cave:132172533 269.626