Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02391 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTGCAGGTGATGTTCCTGGATCTGCAGTTTGCTAGGAAGGAGAGCCGCACGGTTGATGCTGCAGTGCTTGAGGAACAAGTTCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAACGAGCCCTCGCCTGCATCTTCGCTGCAGCAAGGTGGCAGTCTTGGGTCCTTCTCCACCGATATCTGTCGGCTATTGCAGCTTTGTGACGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCTAATGATCAGACACTACAGGCTGGGGGTAAGGTCGTGTTCCAAGAGGGCCAACAGCATCATGATTTCCCATTGATTGATGAGTGCAAAAACTCCACCTCAAGTGTTCAAAATGTGGCAGCTAACAACGCAGATGGCCATGCTTTAGAATATCACCAGTTTGATTTGCATCAGGACTATGATCATGGCTTTTACACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACTTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCACGGCCTGCGCAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCGGTTCTAAGACCTGGGGGAATTGGTTTGAAGGATAATTTACTTTTTGCTGCCCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGCGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGCGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCCAGAAAGCAAGTTATGAATGAGTTCGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATATGAAATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGTTAGCTAATGATTCGGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAGCCAAAGTTAATGCAAAAGTTGGCATAGGTGGTGTCTATTCAGCATCACACAGAGTGCCTACACTGAATGGAGCATACGAGTATGGGTTAGCTGCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1434 0.477 MKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQAGGKVVFQEGQQHHDFPLIDECKNSTSSVQNVAANNADGHALEYHQFDLHQDYDHGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKLANDSVADLQKQMGRLSAEFPHDNKRAAKGRAKVNAKVGIGGVYSASHRVPTLNGAYEYGLAAPYDYLVENMGDYYGT* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02391 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02391 Lapu-Chr3 45482526 45488772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02391 3 475 VOZ-9 Transcription Factor Family AT1G28520 71.894 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lapu3g02391 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02391 - - pvu:PHAVU_003G073700g 963.37