Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02383 ATGGGTTTCTGCAGCAAGGGTAGTGAAGAGAGTGAAATGTCTCACGCTCAAATCCACCTGTACAAACACGTGTACAACTTTATGAGCTCTATGGCTCTCAAGTCCGCCATGGAATTAGGCATAGCAGACGCTATCCACAGCCACGGAGAAGCCATGACCATTTCCGAGTTAGCCTCTGCACTCAAACTGCACCACTCAAAAGTCTCTGTCCTCCACCGATTCATGCGCCTTCTAACACATAATGGGTTCTTCGCCAAAACAACAGTGGCGTCACCTGAAGAAGGAGGAGGAGAAGAAACAGTGTATGATCTGACCCCTCCTTCGAAGCTTCTAATCCGAAGCAAGTCAACGTGTTTGTCAGCTATTGTTAAGGGCGCGCTTCATTCGAGTTCCCTCGACATGTGGCACTCCTCCAAGAAGTGGTTCACTGAGGATAAGGAAATCTCACTGTATGAGAGTGCCAATGGGGAGAGTTTCTGGAACTTTTTGAACAAAACCACTGAGTCTGATACGCTTACCATGTTTCAAGAAGCCATGGCGGCAGATTCTAGAATGTTCAAGATGGCTCTGGAAGAGTGCAAGCATGTGTTTGAGGGATTGACTTCCCTTGTCGATGTGGGAGGTGGGACTGGTGCTGTCGCCAGGCTCATCAATGAACTCTTCCCTCAACTGAAATGCACAGTGTTTGATCAACCACAGGTTGTGGCTAACTTGACTTCAACTGAAAATTTGAACTTTGTTGGTGGAGATATGTTCAAATCCATTCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAACGATGAGCTCTCAGTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAAAGGGAAAGAAGGAAAAGTGATAATCATAGACATAGCAATTGATGAAACAAGTGATGATGGTGAATTGACAGAGTTGAAGTTGGACTATGACTTGGTGATGCTCACTCTCTTTAATGGAAAAGAAAGAGAGAAAAAAGAGTGGGAGAAGCTTATTTACGATGCAGGTTTCAGCAGCTACAGCATTATCCCTATATGTGGCTTCAAATCTCTCATCCAACTTTATCTTTAA 1095 0.4457 MGFCSKGSEESEMSHAQIHLYKHVYNFMSSMALKSAMELGIADAIHSHGEAMTISELASALKLHHSKVSVLHRFMRLLTHNGFFAKTTVASPEEGGGEETVYDLTPPSKLLIRSKSTCLSAIVKGALHSSSLDMWHSSKKWFTEDKEISLYESANGESFWNFLNKTTESDTLTMFQEAMAADSRMFKMALEECKHVFEGLTSLVDVGGGTGAVARLINELFPQLKCTVFDQPQVVANLTSTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGKGKEGKVIIIDIAIDETSDDGELTELKLDYDLVMLTLFNGKEREKKEWEKLIYDAGFSSYSIIPICGFKSLIQLYL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02383 364 FunFam O-methyltransferase ZRP4 114 364 - -
Lapu3g02383 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Lapu3g02383 364 FunFam Coniferyl alcohol 9-O-methyltransferase 4 111 - -
Lapu3g02383 364 Pfam O-methyltransferase domain 135 346 IPR001077 GO:0008171
Lapu3g02383 364 PIRSF O-mtase 4 364 IPR016461 GO:0008168
Lapu3g02383 364 CDD AdoMet_MTases 203 302 - -
Lapu3g02383 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Lapu3g02383 364 Gene3D - 3 111 IPR036388 -
Lapu3g02383 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 360 IPR029063 -
Lapu3g02383 364 Gene3D Vaccinia Virus protein VP39 113 363 IPR029063 -
Lapu3g02383 364 PANTHER O-METHYLTRANSFERASE 12 347 IPR016461 GO:0008168
Lapu3g02383 364 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02383 Lapu-Chr3 45414921 45416770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02383 30 351 Monolignol Biosynthesis Gene Families AT5G54160 34.462 2.74e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02383 K22588 - gmx:106795493 617.846