Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02377 ATGGATACTAATTCAAGAAACTGGAGATGGACAAGAATGGCCCAATTGCTTGTAGCTTCTGCTCTCCTTTTACTGCAAAACTCTATGGCCATCTCTGCAGAGACAAGCTCTGTGCACATTGTATACATGGGAGATAAGATATATCAAAATCCACAAACTACTAAAAGGTATCATCACAAAATGTTATCATCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCGATTCTTTACAGCTATAAGCATGGTTTTTCAGGGTTTGCAGCAAGATTGACAAAACATCAAGCAGAAGCAATAGGAAAGTTTCCTGGGGTAGTTTCTGTCATTCCAAATGGCTTTCACAAACTCCATACAACCAGGAGCTGGGACTTTATTGGGATCCATCATTCCACTTCTAAAACTGCTTTGACTAACATCAACTTAGGTGAAGGAACCATCATAGGCGTCATAGACACAGGAATTTGGCCAGAGTCAGCAAGTTTCAATGATGAAGCAATGGGAGAAATCCCATCAAGGTGGAAAGGAGTTTGTCAGGTGGGAGAGCACTTCAACTCGACCAATTGTAACAAGAAGATAATAGGTGCTAGATGGTTTCTGAAAGGAATAACTGATCAGACTAAGAAGCTTCTTCAAGGAAACAACACTAATGAATATCTCTCAGCAAGAGATGCTATTGGCCATGGTACTCATACAGCTTCCACAGCAGCTGGTTACTTTGTTGGAAATGCAAACTATAGAGGACTTGCTTCTGGCTTAGCCAGAGGAGGAGCACCCTTGGCTCACTTAGCTATCTACAAGGCTTGTTGGGACTTTCCAATTGGAGATTGTACTGATGCTGATATCCTGAAAGCTTTTGACAAGGCTATACATGATGGCGTTGATGTTTTAACTGTTTCTCTTGGCTTTTCCATTCCCTTGTTCTCCTATGTTGATCAACGTGATGTAATAGCAATTGGTTCCTTTCATGCAACTGCCAAGGGAATCACAGTCGTTTGTTCTGCTGGAAATTCTGGTCCTCTCTCGCAAACCATTACAAATACTGCACCATGGATCATCACAGTTGGAGCTACCACCATAGATAGGGCCTTTCCAGCCGCCATCACTCTTGGAAATAACCGCACTGTGTGGGGGCAGTCCATTGATACTGGAACACATAATCTTGAATCTGTTGGGCTCACATATTCTGAACGCGTTGCTCTTAACCCATCAGATAATTTGGCCAAGGATTGCCAATCTGGAAGTCTGAATGCGACTATGGCAGCAGGCAAAATTGTTCTGTGCTTTTCCGTATCAGATCAACAAGACATTGTTTCTGCATCACTTACAGTGAAGGAAGCTGGAGGAGTTGGACTAGTATATGCACAATATCATGAAGATGGACTCAATCAATGTGGTTTGTTTCCCTGTATCAAGGTAGACTATGAAACGGGGACACAAATACTAACCTATATTAGAAGATCAAGGTTTCCAACAGCAAGCCTAAGTTTTCCAACGACTGTTATCGGAAAATGGACATCACCACGAGTTGCCTCTTTCTCGTCTAGAGGACCCAGTAGCATGTCTCCGACAGTGCTAAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCTGCATTTCCTTCAAAGGGAACAACAAAGAGCAGTGGATTTGCATTCTTGTCTGGAACTTCAATGTCTTGTCCTCATGTGGCAGGAATAGCAGCTGTCATGAAATCCAAAAACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCATGTCAAACTGGAAAAGATGGAAACGTTATATCTGAAGAGGGTTCCACACACAAGGCAGCAGACCCTTTTGATATTGGGGGTGGACAGATGGACCCCAACAAAGCAATGGATCCAGGACTCATATATGATATAACCACAGAGGATTATGTTCGATTCCTATGTTCCATGGGTCACAGTAGTGCATCCATTAGCAAAGTGACCAAGACCACCACAACTTGTAAGAAAGAAAAACACCAAGCATTTAACCTCAACCTTCCTTCCATATCAGTTCCAAACCTGAAGAAGGCTGTAACAGTAATGAGAAGAGTGACAAACGTGGGAAACGTAACTGCGGTCTACAAAGCTCTACTGCAGGTTCCATATGGCATAAAAGTGAGAGTTGAACCTGAAACTTTGAGTTTCAATTCAGACACACGCGTTCTTACCTTCAATGTCAGTTTCCAGTCAACTCAAAAGTTTCACGGAGATTACAAATTTGGGAGCCTGACATGGACAGATGGAAAGCATTTTGTGAGGACCCCAATTGTTGCGAGGACCATGCAATTTTGA 2322 0.4285 MDTNSRNWRWTRMAQLLVASALLLLQNSMAISAETSSVHIVYMGDKIYQNPQTTKRYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKHQAEAIGKFPGVVSVIPNGFHKLHTTRSWDFIGIHHSTSKTALTNINLGEGTIIGVIDTGIWPESASFNDEAMGEIPSRWKGVCQVGEHFNSTNCNKKIIGARWFLKGITDQTKKLLQGNNTNEYLSARDAIGHGTHTASTAAGYFVGNANYRGLASGLARGGAPLAHLAIYKACWDFPIGDCTDADILKAFDKAIHDGVDVLTVSLGFSIPLFSYVDQRDVIAIGSFHATAKGITVVCSAGNSGPLSQTITNTAPWIITVGATTIDRAFPAAITLGNNRTVWGQSIDTGTHNLESVGLTYSERVALNPSDNLAKDCQSGSLNATMAAGKIVLCFSVSDQQDIVSASLTVKEAGGVGLVYAQYHEDGLNQCGLFPCIKVDYETGTQILTYIRRSRFPTASLSFPTTVIGKWTSPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPSKGTTKSSGFAFLSGTSMSCPHVAGIAAVMKSKNPTWSPAAIRSALVTTACQTGKDGNVISEEGSTHKAADPFDIGGGQMDPNKAMDPGLIYDITTEDYVRFLCSMGHSSASISKVTKTTTTCKKEKHQAFNLNLPSISVPNLKKAVTVMRRVTNVGNVTAVYKALLQVPYGIKVRVEPETLSFNSDTRVLTFNVSFQSTQKFHGDYKFGSLTWTDGKHFVRTPIVARTMQF* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02377 773 CDD Peptidases_S8_3 114 591 IPR034197 -
Lapu3g02377 773 Pfam Fibronectin type-III domain 673 767 IPR041469 -
Lapu3g02377 773 FunFam Subtilisin-like protease SBT5.3 27 117 - -
Lapu3g02377 773 SUPERFAMILY Subtilisin-like 116 631 IPR036852 GO:0004252|GO:0006508
Lapu3g02377 773 Gene3D - 360 501 - -
Lapu3g02377 773 ProSiteProfiles Serine proteases, subtilase domain profile. 121 627 - -
Lapu3g02377 773 Pfam Peptidase inhibitor I9 38 116 IPR010259 -
Lapu3g02377 773 CDD PA_subtilisin_like 367 494 - -
Lapu3g02377 773 FunFam Subtilisin-like protease SBT1.5 144 373 - -
Lapu3g02377 773 FunFam subtilisin-like protease SBT1.5 360 501 - -
Lapu3g02377 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 767 IPR045051 -
Lapu3g02377 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Lapu3g02377 773 Gene3D Peptidase S8/S53 domain 144 640 IPR036852 GO:0004252|GO:0006508
Lapu3g02377 773 Pfam Subtilase family 142 593 IPR000209 GO:0006508|GO:0008236
Lapu3g02377 773 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lapu3g02377 773 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Lapu3g02377 773 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Lapu3g02377 773 MobiDBLite consensus disorder prediction 598 620 - -
Lapu3g02377 773 Gene3D - 644 771 - -
Lapu3g02377 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 117 IPR037045 -
Lapu3g02377 773 FunFam Subtilisin-like protease SBT1.5 644 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02377 Lapu-Chr3 45325957 45330114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02377 30 770 Subtilisin-like Serine Gene Family AT1G32960 51.531 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02377 - - gmx:100792709 1387.47