Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02370 ATGGAGCTTCTCAATTCCTTCTCACTCCTTTTCACCTTTGCCTGCATATTCCTTGCATTGTTCATCACTAAGAACCTTTCAAATCCCTACAAGTCCCTGAAAAACTTGCCACCTGGTCCATGGAAGCTACCTCTTCTAGGCAACATTCACCAATTTGTAGGTGCACTTCCCCATCAAACTTTGAGAAAATTGGCTAACCAATATGGACCCTTGATGCACCTACAACTTGGTGAAAGGTCACACATAATAGTCTCTTCAGCAGATATTGCCAGAGAGGTTATGAAAACTCATGATGTCATTTTTGCCAACAGGCCTCATCTTATTGCTTCCAAATTCTTTGTTTATGATAGCAGTGAAATAGTCTTTTCTCCTTATGGAAGAACTTGGAGACAACTTAAGAAGATATGCATTTCAGAGTTGCTAAATGCAAAGCATGTTAGATCACTGAGGCACATAAGAGAAGAAGAGGTGGCTAAACTAGTTAGAAACATGTGTGCCAATGAAGGATCAGTTGTGAACCTCACCAAGGAAATTGAGTCAGTGATGAATGGAATAATTGCAAGGGCAGCAAATGGCAAAAGGTGCAAAGACCAAGAAGCTTTCATATTAGCCACGGAGGAAACGCTGAAGCTGTTGGGAGGTTTCTCTATTGCTGATTTCTACCCTTCAATCAAAGTGCTTCCTTTTCTTACAGGAATGAAAACTAAACTTGAAAGGGCGCAGAGCGAGAATGAGAAGATCATAGAAAATATGGTGAAGGATCACAGGGAAAATAAGAACAACCACAGGCAGTTTCAAGAGGATTTTATTGACATTCTTCTCAAAACACAAAAGAGAGATGACCTAGAAATTCCCTTGACTCATCACATCATCAAAGCACTCATCTGGGACATGTTTGTTGGTGGGACTGCAGCACCAGCAGCAGTTATAGAATGGGCAATGTCAGAACTGATGAGAAATCCTAAGGCTATGGAGAAGGCACAGAGTGAGGTAAGAAAGGTGTTCAATGAGAAAGGGTATGTGGATGAAGCAAAGATTGGAGAGTGTGAGTTCTTAAATTCAGTGATCAAAGAAACAATGAGGCTGCATCCCCCAGAGGCATTGTTGGTTCCAAGAGAAAACAGTGAGGCATGTGTGATCAATGGATATGAAATCCCTGCAAAGAGCAAGGTGATTATCAATGCCTGGGCCATTGGAAGAGATCCAAGGTATTGGATTGAAGCAGAGAGATTTATGCCAGAAAGATTTGGTGAGAGTTCTTATGATTTCAGTGGCACAAACTTTGAATACATCCCCTTTGGTGCTGGAAGGAGAATTTGTCCTGGAGCTGCATTTTCCCTGCCTAACATGTTGCTGTCACTGGCCAATTTGCTTTACCATTTTGTTTGGAAGCTTCCAAATGGAACAACACACCAAGAATTTGACATGGCTGAGACCTTTGGCCTTACTGTTCAAAGAGCAAATGATCTTTGCTTAATCCCCATGCCTTATCACCCTTCCACACTTCACCATCACCAACAAACTTTAACCTAA 1533 0.4162 MELLNSFSLLFTFACIFLALFITKNLSNPYKSLKNLPPGPWKLPLLGNIHQFVGALPHQTLRKLANQYGPLMHLQLGERSHIIVSSADIAREVMKTHDVIFANRPHLIASKFFVYDSSEIVFSPYGRTWRQLKKICISELLNAKHVRSLRHIREEEVAKLVRNMCANEGSVVNLTKEIESVMNGIIARAANGKRCKDQEAFILATEETLKLLGGFSIADFYPSIKVLPFLTGMKTKLERAQSENEKIIENMVKDHRENKNNHRQFQEDFIDILLKTQKRDDLEIPLTHHIIKALIWDMFVGGTAAPAAVIEWAMSELMRNPKAMEKAQSEVRKVFNEKGYVDEAKIGECEFLNSVIKETMRLHPPEALLVPRENSEACVINGYEIPAKSKVIINAWAIGRDPRYWIEAERFMPERFGESSYDFSGTNFEYIPFGAGRRICPGAAFSLPNMLLSLANLLYHFVWKLPNGTTHQEFDMAETFGLTVQRANDLCLIPMPYHPSTLHHHQQTLT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02370 510 CDD CYP71-like 67 490 - -
Lapu3g02370 510 PANTHER OS08G0105600 PROTEIN 60 499 - -
Lapu3g02370 510 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 Gene3D Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Lapu3g02370 510 FunFam Cytochrome P450 99A2 26 495 - -
Lapu3g02370 510 Coils Coil 230 257 - -
Lapu3g02370 510 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02370 510 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02370 Lapu-Chr3 45216765 45220709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02370 10 494 Cytochrome P450 AT3G26310 39.474 2.24e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02370 - K23806 gmx:100779120 804.668