Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02348 ATGAATTTTAGTGCAAATGAGACTTTACTATTGTCAATTGAACATAACAAAGTTTCCTCGTATAATGTGTGCATTGCTGCTCCACCCAATATTGTTTCAGATGGTATATGGGGTGGCCAAATCAATGGCAGGACTCCAATGAAATCTTCACTCCCATTTTTTGAGTTGCAGACTGGCCTGATTCTAGGTAGTGCCGTTCAGGTAGAGACGCTAGACAACTACAAGAAGAAGTTGTTTCCATATCCAAGTCAGGGCACACTAGCAACAGTAACATCAATTGGTTATGCACTTTTCATCTTTATAAGTGGTGTGCAAATGGATTTGAGCATGATAACCAGGAGTGGACACAGGGCATGGACCATTGCCATCAGTGGATTGTCTGTGCCGTTAATTATTTGCCTCCCACTTGCAAACATGTTTACTGAAAAATTAAGTATTCTAGTTAGAGATGGAGATCAGATATTTAATTTTACTCCTGTAGTGCTATCAGAAACTGTAATTTCATTTGTAGTAGTTGCTTCCCTCCTCAATGAACTTAAAATCCTTAACTCCGAACTTGGCAGGTTGGCATTATCCTCAGTATTGGTGAGTGACATATTGAGCAAAATCATTGCATGTGTTACCAATGTCTTAAAAGACACAGAAGAGAACTTTAACATTGTAGTGCTCTTAGTATCACTGATTGCCTTTGGCATCTTTGTTCCCTTAATTTTTCGGCCAGCAATGTTTTGGATCATCAAACAAACTGCACAAGGAAGGCCTGTGAATGATGGCTATGTCTATCTTATCATCACAATGGTCTTTGTTTTAGGTTGGGTTGCAGTTCAAATAAATCAGGACTTTATCCTAGGAGCATTTATTTTGGGGTTGGCTGTGCCAGAAGGGCCACCACTAGGATCTGCATTGGTCAAGAAACTTCACTTCTTTGGTAACTGTTTCTTCTTGCCAATTTTTGTGACTTGCAGCGTAATGAAGGCAGACTTTTCCCTTGAGTATCCATCAAAAGTAGTTATGGTCACTGCTTACATCACTTTTTTCACTCACTTTGTCAAAGTAATTGCTTGCACTATACCTGCCCTCTTTAGCAAGATTCCCTTCAAAGATGCATTGGCCCTTGCCCTAATTTTGAACGTTAAAGGGGTAGTGGAAGTTGCTGCTTACGGAATCTTATACGACGAAGGGACAATTGGTGGCCATGTTTATGGAATAATGATGATCAGCATAATGATAATAGCATGCATAGTGAAATGGTCTGTGAAACTATTGTATAATCCATCAAGAAAATACGCTGGCTACCAGAAAAGGAACATCACGAGTTTAAAACCAGACTCAGAGCTGAGAATACTTGCGTGCATTCATAAAACATACAATATATCTGCTATGAAAGATGTCCTTGATCTTTGTGGTCCAACAACAGAGAACCCCATCATTGTGGAAGTATTGCATTTGATCGAGCTGGTTGGAAGGACCTCTCCCATTTTCATTTCTCATCGCATTCAGAGAAGCATCTCATCGAATTCCCACAAGTCTTATTCAGATGATGTACTTCTTGCCTTTGACCTCTACCAGCATGAGAACATTGGTGCAGTAAGTACAAACAGCTACACAGCTATATCTCCACCCACCCTGATGCACGAGGATGTTTGTCAACTTGCATTGGACAAAGTGGCATCCATTATAATTCTTCCATTCCATCTGAGATGGACAAGTGATGGTGTCATTGAGTCTGATGACAAGAACGCTAGGGCCTTAAATTGTAAGGTCCTGGAAATAGCTCCATGCTCAGTTGGAATACTTGTGAGTCGCTTTCCCATTACAGTTGAGTCAAGCATTAAGCTAGCAATGATTTTTGTGGGTGGAAAAGATGACAGAGAGGCTTTGTGCTTGGCCAAACGAGCAACGAGGAATTCGAGGGTCAACTTGGTTGTGTACCACCTTGCTCCTCAGGAATGCATACCAGACATGGAGTATCTACGAGATAACATGGCACTGAAAGATATTAAGACACTGCAGTCAAGCTTGGGAGATGTAATTAGTTACCACAAAGTCATAGTAAATAACGGACATGAGACATCTGTTGTTCTTCGCCAAATAGCAAATGAACATAACTTTTTTATCATTGGAAGAAGACATGATTTAGAGTCACCTCAGACACAGGGGCTCACCAATTGGAGTGAGTTTTCAGAGTTAGGTGCCATTGGTGATTTGCTTGCTTCATCAGATTTTGGGAGTAGATCGTCTGTTTTGGTTGTGCAGCAACAAGTCAAAGAAACATGA 2277 0.4067 MNFSANETLLLSIEHNKVSSYNVCIAAPPNIVSDGIWGGQINGRTPMKSSLPFFELQTGLILGSAVQVETLDNYKKKLFPYPSQGTLATVTSIGYALFIFISGVQMDLSMITRSGHRAWTIAISGLSVPLIICLPLANMFTEKLSILVRDGDQIFNFTPVVLSETVISFVVVASLLNELKILNSELGRLALSSVLVSDILSKIIACVTNVLKDTEENFNIVVLLVSLIAFGIFVPLIFRPAMFWIIKQTAQGRPVNDGYVYLIITMVFVLGWVAVQINQDFILGAFILGLAVPEGPPLGSALVKKLHFFGNCFFLPIFVTCSVMKADFSLEYPSKVVMVTAYITFFTHFVKVIACTIPALFSKIPFKDALALALILNVKGVVEVAAYGILYDEGTIGGHVYGIMMISIMIIACIVKWSVKLLYNPSRKYAGYQKRNITSLKPDSELRILACIHKTYNISAMKDVLDLCGPTTENPIIVEVLHLIELVGRTSPIFISHRIQRSISSNSHKSYSDDVLLAFDLYQHENIGAVSTNSYTAISPPTLMHEDVCQLALDKVASIIILPFHLRWTSDGVIESDDKNARALNCKVLEIAPCSVGILVSRFPITVESSIKLAMIFVGGKDDREALCLAKRATRNSRVNLVVYHLAPQECIPDMEYLRDNMALKDIKTLQSSLGDVISYHKVIVNNGHETSVVLRQIANEHNFFIIGRRHDLESPQTQGLTNWSEFSELGAIGDLLASSDFGSRSSVLVVQQQVKET* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02348 758 Pfam Sodium/hydrogen exchanger family 52 413 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu3g02348 758 Gene3D - 46 430 IPR038770 -
Lapu3g02348 758 PANTHER CATION/H + ANTIPORTER 54 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02348 Lapu-Chr3 44891026 44894564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02348 72 751 Antiporter Super Family AT3G44900 39.004 1.47e-157 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02348 K26731 - gmx:100797995 1129.78