Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02344 ATGGAGCCCTGCTTCTTCATCATTCTCTCTCTCTGTGTTTGCGTCTTATACTTCTTCTCCCTTCACAACAGAACCACCACCACCGCCACCACCCCTCCCGGCCCTTCACACATCCCAATCATCTCAAACATCCTTTGGCTAACAAAATCCTTTCAAATCGAACCAATTCTCCGAACCCTCCACGCCAAATACGGTCCCATACTCACTCTCCATATTGGTTCTACCACCGCCGTCTTCATACGCGACCGCTCTCTCGCCCACCAAGCCCTCGTCCAAAATGGTTCTATTTTCTCCGATCGCCCCAAGGCTCTCGCCGCCGCCAAAATCATAACCACCCACCAGCACAACATTAGCTCCGCCTCCTATGGCGCCACGTGGCGTACCCTCCGCCGTAACCTCACCTCCCAGACGCTCCACCACTCCCGCGTCAAATCCTTCTCTGGGATCCGCAACTGGGTCCTCCGCACCCTCCTCACCAACCTGAAATCCCATTCTCAATCCAACAATTCCGTCAGAGTCATCAACCACTTCCAATACTCCATGTTCTGCTTGCTCGTATTCATGTGCTTCGGGGAACGACTCGATGATGCCAAAGTCAGAGACATCGAGCGCGTGCAGCGCCAGATGCTTCTTCGCTTTAGAAGCTTCAGAATCCTCAATTTCTGGCCCAGAGTCACGCGCGTTTTGTTCCGCAAACTCTGGGAGGATTTGCTGAGGCTTCGGAAGGAGCAAGAGGATGTTTTGGTTCCGCTTATAAGAGCGAGGAAGCAAAAGCAAAACCAAGCCAGGGAGGAAGGTGTTGTTTCGTATGTTGATACTTTGTTGGATTTGCAGTTGCCTGAGGAGAAACGTAAGCTCAACGAGGAGGAACTCGTGACGCTGTGTAATGAGTTTTTAAACGCGGGTACGGATACGACTTCCACTGCGTTGCAGTGGATCATGGCGAATTTGGTGAAGTACCCTCATGTCCAAGAGAGGTTGGTGGATGAGATAAGGGAGGTATTGGGCGAGAGAGAAGAGAGAGAAGTGAAAGAAGAGGACTTGCAGAAACTGCCTTATCTGAAAGCTGTGATTTTGGAGGGTTTGAGGCGTCACCCACCGGGGCACTTTGTGCTGCCGCATGCAGTGAGTGAGGACGTGGTTTTTAATGATTACTTGGTCCCTAAGAATGGGACAGTGAATTTCATGGTGGCGGAGATGGGGTGGGACCCCAAGGTTTGGGAGGATCCGATGGCGTTTAAGCCAGAGAGGTTCATGAATGATGAGGGGTTTGATATTACTGGGAGTAAAGAGATCAAGATGATGCCCTTTGGTGCAGGGAGGAGGATTTGCCCTGGCTATACTCTGGCCTTGCTTCATTTGGAGTACTTTGTGGCCAATTTGGTTTGGAATTTCGAGTGGAAGGTTCCAGTGGGAGGGCATGTGGATTTGTCAGAGAAACAAGAGTTCACTGTGGTGATGAAAAATCCATTGCTGGTTCATCTTTCTCCTAGGATCTAG 1500 0.5073 MEPCFFIILSLCVCVLYFFSLHNRTTTTATTPPGPSHIPIISNILWLTKSFQIEPILRTLHAKYGPILTLHIGSTTAVFIRDRSLAHQALVQNGSIFSDRPKALAAAKIITTHQHNISSASYGATWRTLRRNLTSQTLHHSRVKSFSGIRNWVLRTLLTNLKSHSQSNNSVRVINHFQYSMFCLLVFMCFGERLDDAKVRDIERVQRQMLLRFRSFRILNFWPRVTRVLFRKLWEDLLRLRKEQEDVLVPLIRARKQKQNQAREEGVVSYVDTLLDLQLPEEKRKLNEEELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQERLVDEIREVLGEREEREVKEEDLQKLPYLKAVILEGLRRHPPGHFVLPHAVSEDVVFNDYLVPKNGTVNFMVAEMGWDPKVWEDPMAFKPERFMNDEGFDITGSKEIKMMPFGAGRRICPGYTLALLHLEYFVANLVWNFEWKVPVGGHVDLSEKQEFTVVMKNPLLVHLSPRI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02344 499 CDD CYP77_89 63 491 - -
Lapu3g02344 499 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 FunFam Cytochrome P450 family protein 25 499 - -
Lapu3g02344 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 492 - -
Lapu3g02344 499 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Lapu3g02344 499 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g02344 499 Pfam Cytochrome P450 32 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02344 Lapu-Chr3 44834896 44836641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02344 1 498 Cytochrome P450 AT1G64940 55.969 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02344 K24184 - gmx:100805244 795.423