Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02333 ATGCTAGGTGGGGGTAGCAAAAGCAGCACGAGACTAGGAGAATCATCATGTTCATGTCCACCCAGAATGGTTAAAATTTCAGCTGAGCCTTCTTCTTCTTCTTGCTCTTCTATAGTACCTCTTAAAAGACACGATGTTTTCATCAGTTTTAGAGGTGAGGACACGCGCAACAGCTTCACAAGCCATCTCTATGCTGCCTTTCAGCACAAAAAGATCCAAGCCTTCATAGATAACAGGCTTCACAAAGGGGATGACATCTCTTCCTCTATATTGGAAGCCATCAAACACTCGAACATATCTTTGGTTGTTCTCTCCAAGTACTATGCTTCCTCCACATGGTGCTTGCGTGAACTCACCAAAATACTTGAACTCAAGAAACGTGGTGGACAAATTGTGATACCTGTGTTCTATAAGATTGACCCCTCCCATGTAAGGAAGCAGACAGGAACTTATCGAATGGCGTTTCAAAATTATGTAAGAGATGTCAAACACAACATGACCATGTTGCAGAAATGGAAAGCTGCTCTCACTGAAGTGGCCGATATAGGTGGATGGGAATCAAAGAAATTTGGGACGGAGTATGAACTCATTGAGGAAATTGTCAAAGATGTTATGCAAAAACTGAATCATATGTATCCCCTTGAAGTAAAAGAAACACTTGTTGGAATTGATCAAAATCTTGGTCCTATTGAATCATTATTAAGAATAAGGTCAAAAGAAGTTCGCATAATTGGAATTTGGGGCATGGGTGGATTAGGTAAGACAACCATTGCCAGCGCTTTATTTGCAGAATTTTCATCTCAATTTGAAGCTAGTTGCTTCTTGGAAAATATAATGAAAGAAGATGAAAAACAAGGACTTGATTGTTTACGCAATAAACTTCTTTCTGAGTTATTAGAAGATGTGAATCCCCATAACACTTCCAAAGTAACATCTACGTTTATTATGAGGAGGCTTAGACAAAAAAAGGTATTGATAGTGCTGGATGATGTGGACGATCCAAAGAAACTCGAATATCTTGTTGCACAACATGATTGCTTGGGATCTGGAAGTAGAGTCATTGTCACTACCAGAGACAAGCATGTCCTTAGCAAAGGGGTAGATGATATCTATGAGGTCAAGGGATTGTCCCTTCATCATGCTGTTAAGCTTTTTAGTTTAAATGCCTTCGGGAAAACTTATCCTGAAAAGGGCTTTGAAATGCTATCTAAGCAGGCGGTTGATCATGCAAATGGAAATCCATTGGCTTTAAAAGTTTTAGGTTCAGTTCTCCATTCCAGGAATGAGCAGCAATGGGACAATGCTCTCAGAAAATTCAAGAAGGTTCCAAATGCAGAAATTCAGAATGTCTTGAGATGGAGTTATGATGGATTAGATTATGAACAAAAGAACATGTTCCTGGACATTGCATGCTTTTTCCGAGGAGAAAATGGAGAAAATGTTGTACGGCTACTCGATATTTGTGGTTTCTATGCAGATATTGGTATAAACATCCTTCTAGAAAAAGGTCTCATAACTTTTTCTGATGACGGTAATGTGTGTATGCATGAATTGATACAAGAAATGGGTTGGGAAATTGTTCATCAGGAATCTATCAAAGATCCTGGAAGGCGTAGCCGATTGTGGGATCTTAAAGAAGTCTATGATGTATTGAAAAACAACAGGGGAACTGAAGCAGTTGAAGGCATAATCTTAGATGTGTCTCGAATAGAAGTCTTGCTGCTGAGCTGTGAGACTTTCTCAAGGATGGTAAATATGAGATTTCTCAAATTCTATATGGGGAGCGGTAGGAAATGCAATTTGCACCTTCCTTCAGGTCTCAAATCATTGCCTAATAAATTAATGTACCTACAATGGGATGGATACCCTTCCAAGTCTCTGCCATCAACTTTTTGTCCTGACAACCTTGTTGTGCTTTCCATGATGGAAAGCCACGTTGAGAAACTTTGGGATGGAATCAAGAGTCTCGCAAGCTTGAAAGAGATAAACCTCCATGCCTGCAAAAATTTAACTAATCTCCCAGATTTATCTCAGGCACCAAATCTTGAAACTATAGATGTCTCTAACTGCACTAGTCTGCTTCATGTTCCCTTATCCATCCAATATGTCAAGAAGCTTCTTCTGTTTAACTTGGAATCCTGCAAGAGTCTCAAGAGTCTTCCAAGAAACATTCACTTATGTTCTCTTGAAATGTTCATTCTCAGACGCTGTTCTAGTCTTGATGAGTTTTCAGTGACTTCAGAGAACATGACACGCCTAGACTTGAGAGAAACAGCAATAACAGATTTCCCAGAGTCTCTTTGGCAGCATCTGAACATGCTTGTTTACTTGAATCTGGAATCATGCAACAAACTCAAGAGTCTTACTAGCAAGATTAAGTTAAAATCTCTTCAAAGACTCAATCTAAGAGATTGTTCAATTCTTCAAGTGTTTTCTGTGACTTCGGAGAACATGGAATACTTGAATTTGAGAGGGACATCAATAAAAGAATTGCCAACATCAGTTTGGTGCAATAACAAGCTTTATACTTTGGTTCTTCATTCCTGTAAAAAACTGGTGAATTTTCCTGAAAGACCAAAACTTGAGGATTTACCTCTCATATCCTCCTCTGAAAGGCCAAATATGGATGAACTATGGACTTTGTCATCCTTAGCAGATTTATCACTAAAGGGAAGCAGTGTTGAGAATTTACCTGCAAGCATCAAAGATCTTCCCAGTCTAAAAAAACTTGACTTGACTGAGTGCAAGAAGCTTCGGTCCTTACCAAGCCTTCCACCATCCTTGGAAGACTTATCCTTAGATGAAAGTAATATTGTCTATTTACCTGAAAGTATCAAAGATCTTTCTCATTTGAGAAGACTTACCCTAATTAACCACAAGAAGCTTTTGTCTCCACAGGATCTTCCGCCATCTTTGAAAGCTCCACTACTGAATGAAAGTAAAGTCGATCCACGTCTTGTGAGAATGAAAGGTCTTTCTCAACTACATAATTTTCCTCAGGTTGAGTGGAAAAGATTTCATTCTCTACCAGAGCTTCCACCATTCTTGGAAGAATTTTCACTAAGAGAAAGCAATATTGAGTGCATACCTGAAAGCATTAAAAATCTTTCACGTCTGAGAAAACTAGCCTTAACAAAGTGCACGAGGCTTCAGTATTTACCAGAGCTTCCGCCAAATTTGGAAGATTTGTTTCTAAGTGGATGTGACATTGAAAGCTTGCCAATAAGCATCAAAGATCTTGTTCATTTGCGAAAGCTCACCTTAATTGAGTGCAAGAAGCTCAGGGCTCTGCCAAAGCTCCCACAATGCCTGCAATCATTGTGTACAGCTGACTGCAGATCACTTAAGACTGTTCAAAGTACAAAGAATATCTTAATAGAAAATAGATATACATTCTATTGTAATTGCATAAACTTGGACCAAAAGTCGCGCAACAATATTATTGCAGATGCGCCCTTTGAGGCAGCCTTTACTTCTTTGAAAGAAAGAACACCTCTTGGTCCTCTTATTTCTATTTGTTTGCCAGGAACTGAAATCCCAGACTGGTTCAGCTACCAATCAATAAATTCTTCACTGGACATGGAAATTCCTCTAGAATGGTTCGTTGACTCGGTGTTCTTAGGTTTTGCTCTGTGTCTTGTGATTGGCGGTTTCCAACAGAACAGTTATGAAGGGCATGATCCAGATATCAATTGTTATCACTTTGTAAAATCTGCCTCCAACTCTGGCCCCAGTGTTCCCTTTCTTGGCCATTGCACAACTGTAATGCAGGTGCCAACAGGTTTTGATTCAGATCATATATTTATATGCTACTATCCCACTTTTAATGCCTCCATACTGCAAGATTTTAAGGATTTAAGCTTGTACTATGATGCCAATAACTTAAGACTCAGAGTCATCTTTAAATTTAAGGGTCCATCTCAACGGTTGGACGTTGTTAAGAAGTGCGGGGTCAGACCTCTTTTGATTGCTAATACTGAAAGGCTTCACATAGAAAGTGAACTGCAACCTGAATAG 4017 0.3916 MLGGGSKSSTRLGESSCSCPPRMVKISAEPSSSSCSSIVPLKRHDVFISFRGEDTRNSFTSHLYAAFQHKKIQAFIDNRLHKGDDISSSILEAIKHSNISLVVLSKYYASSTWCLRELTKILELKKRGGQIVIPVFYKIDPSHVRKQTGTYRMAFQNYVRDVKHNMTMLQKWKAALTEVADIGGWESKKFGTEYELIEEIVKDVMQKLNHMYPLEVKETLVGIDQNLGPIESLLRIRSKEVRIIGIWGMGGLGKTTIASALFAEFSSQFEASCFLENIMKEDEKQGLDCLRNKLLSELLEDVNPHNTSKVTSTFIMRRLRQKKVLIVLDDVDDPKKLEYLVAQHDCLGSGSRVIVTTRDKHVLSKGVDDIYEVKGLSLHHAVKLFSLNAFGKTYPEKGFEMLSKQAVDHANGNPLALKVLGSVLHSRNEQQWDNALRKFKKVPNAEIQNVLRWSYDGLDYEQKNMFLDIACFFRGENGENVVRLLDICGFYADIGINILLEKGLITFSDDGNVCMHELIQEMGWEIVHQESIKDPGRRSRLWDLKEVYDVLKNNRGTEAVEGIILDVSRIEVLLLSCETFSRMVNMRFLKFYMGSGRKCNLHLPSGLKSLPNKLMYLQWDGYPSKSLPSTFCPDNLVVLSMMESHVEKLWDGIKSLASLKEINLHACKNLTNLPDLSQAPNLETIDVSNCTSLLHVPLSIQYVKKLLLFNLESCKSLKSLPRNIHLCSLEMFILRRCSSLDEFSVTSENMTRLDLRETAITDFPESLWQHLNMLVYLNLESCNKLKSLTSKIKLKSLQRLNLRDCSILQVFSVTSENMEYLNLRGTSIKELPTSVWCNNKLYTLVLHSCKKLVNFPERPKLEDLPLISSSERPNMDELWTLSSLADLSLKGSSVENLPASIKDLPSLKKLDLTECKKLRSLPSLPPSLEDLSLDESNIVYLPESIKDLSHLRRLTLINHKKLLSPQDLPPSLKAPLLNESKVDPRLVRMKGLSQLHNFPQVEWKRFHSLPELPPFLEEFSLRESNIECIPESIKNLSRLRKLALTKCTRLQYLPELPPNLEDLFLSGCDIESLPISIKDLVHLRKLTLIECKKLRALPKLPQCLQSLCTADCRSLKTVQSTKNILIENRYTFYCNCINLDQKSRNNIIADAPFEAAFTSLKERTPLGPLISICLPGTEIPDWFSYQSINSSLDMEIPLEWFVDSVFLGFALCLVIGGFQQNSYEGHDPDINCYHFVKSASNSGPSVPFLGHCTTVMQVPTGFDSDHIFICYYPTFNASILQDFKDLSLYYDANNLRLRVIFKFKGPSQRLDVVKKCGVRPLLIANTERLHIESELQPE* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02333 1338 Gene3D - 41 208 IPR035897 -
Lapu3g02333 1338 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 185 IPR035897 -
Lapu3g02333 1338 Pfam Leucine Rich Repeat 635 654 IPR011713 -
Lapu3g02333 1338 Pfam NB-ARC domain 232 445 IPR002182 GO:0043531
Lapu3g02333 1338 ProSiteProfiles TIR domain profile. 42 208 IPR000157 GO:0007165
Lapu3g02333 1338 FunFam Disease resistance protein (TIR-NBS-LRR class) 41 210 - -
Lapu3g02333 1338 Pfam TIR domain 44 223 IPR000157 GO:0007165
Lapu3g02333 1338 SUPERFAMILY "Winged helix" DNA-binding domain 446 552 IPR036390 -
Lapu3g02333 1338 PRINTS Disease resistance protein signature 410 424 - -
Lapu3g02333 1338 PRINTS Disease resistance protein signature 318 332 - -
Lapu3g02333 1338 PRINTS Disease resistance protein signature 243 258 - -
Lapu3g02333 1338 PRINTS Disease resistance protein signature 902 918 - -
Lapu3g02333 1338 Pfam C-JID domain 1174 1319 IPR045344 -
Lapu3g02333 1338 SMART till_3 43 182 IPR000157 GO:0007165
Lapu3g02333 1338 FunFam Disease resistance protein RPS4 557 748 - -
Lapu3g02333 1338 Gene3D - 376 459 IPR042197 -
Lapu3g02333 1338 Gene3D Ribonuclease Inhibitor 543 748 IPR032675 -
Lapu3g02333 1338 Gene3D Ribonuclease Inhibitor 749 927 IPR032675 -
Lapu3g02333 1338 Gene3D Ribonuclease Inhibitor 928 1128 IPR032675 -
Lapu3g02333 1338 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 44 805 IPR044974 GO:0006952
Lapu3g02333 1338 SUPERFAMILY L domain-like 533 859 - -
Lapu3g02333 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 469 IPR027417 -
Lapu3g02333 1338 SUPERFAMILY L domain-like 817 1138 - -
Lapu3g02333 1338 Gene3D - 209 369 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02333 Lapu-Chr3 44712562 44717131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02333 42 835 WRKY Transcription Factor Family AT4G12020 36.453 5.97e-123 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02333 - - gmx:100797269 2172.13