Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02322 ATGGAAGGGAATGCGAAAAGCGAGGAAATCGTGGATGTAGGATCGGTTGTGGAAGCTGTTTCAGCCGAGGACGGCGACGCTCCTCTCTACACCCTTGAAAGTCTTTGCATGCGATGTGGTGAAAACGGTATTACAAGATTTTTATTGACTTTAATTCCTCACTTCAGAAAGATTTTGTTATCAGCATTTGAATGTCCACATTGTGGAGAGAGGAACAATGAAGTACAGTTTGCCGGTGAAATTCAACCACGTGGTTGTCGTTACACTTTGATGGTTCCATCAAGCGAACAAAAGATGCTAAATCGACAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAACGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGCAGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCAGACACAGCTGAAGCAATTGATCAGTTCTTGGTGAAACTGCGAGCTTGTGCAACTGGAGAATCATCCTTCACATTTATTCTTGATGATCCTGCCGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCATTGACGATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCCGCACAGATTGAAGGAACTCATGATGATGCCCTGGAAGGGGGAGAAGCTGTGACTACTGATCAAGTGAGGAGAGAACCACATGGATCAATAGGGGCAACAGCTGGCCATCGAGCCATTGCACAGAGTAACAGTGCAGAAATTGCTGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCTACTTGTGGTGCCTGTGCTGCTAGGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACTTGTGATGTCTGCGGTTACCGCAACTCTGAGTTGAAACCTGGTGGAAGAATTCCTGAGAAAGGAAAAAAAATTACTCTTTCTGTGAAGAATGTCAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACTACTGTTGAAGGTTTGATCACAAGAATTAGTGAAAGCATTGAGAGGATCCATGGGTTTACTTTTGGAGACAGTCTTGAAGAAAATAGTAGAAGCAAGTGGATAGACTTCAAAGCAAGGCTGAACAAGCTTCTTATCTTGGAAGAAGCCTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAATCAATTAGCATTTGAGGAATATGAGAGATCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTTATGCACCAACCACTGCTTCTAAAACTGAGTGA 1500 0.4333 MEGNAKSEEIVDVGSVVEAVSAEDGDAPLYTLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCRYTLMVPSSEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVAPDTAEAIDQFLVKLRACATGESSFTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSAQIEGTHDDALEGGEAVTTDQVRREPHGSIGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAARCETRMFVTNIPYFQEVIVMASTCDVCGYRNSELKPGGRIPEKGKKITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITRISESIERIHGFTFGDSLEENSRSKWIDFKARLNKLLILEEAWTLILDDALANSFVAPATDDLKEDNQLAFEEYERSWEQNEELGLNDMDTSSAEVGYAPTTASKTE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02322 499 PANTHER ZINC FINGER PROTEIN ZPR1 15 491 IPR040141 -
Lapu3g02322 499 SMART zpr1 34 194 IPR004457 GO:0008270
Lapu3g02322 499 SMART zpr1 290 450 IPR004457 GO:0008270
Lapu3g02322 499 MobiDBLite consensus disorder prediction 472 499 - -
Lapu3g02322 499 FunFam Zinc finger protein ZPR1 281 335 - -
Lapu3g02322 499 FunFam zinc finger protein ZPR1 80 221 - -
Lapu3g02322 499 FunFam Zinc finger protein ZPR1 336 478 - -
Lapu3g02322 499 NCBIfam ZPR1 zinc finger domain 291 482 IPR004457 GO:0008270
Lapu3g02322 499 NCBIfam ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Lapu3g02322 499 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Lapu3g02322 499 Gene3D ZPR1, zinc finger domain 280 335 IPR042452 -
Lapu3g02322 499 MobiDBLite consensus disorder prediction 476 499 - -
Lapu3g02322 499 Pfam ZPR1 zinc-finger domain 290 448 IPR004457 GO:0008270
Lapu3g02322 499 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Lapu3g02322 499 Coils Coil 130 150 - -
Lapu3g02322 499 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Lapu3g02322 499 Gene3D ZPR1, A/B domain 336 478 IPR042451 -
Lapu3g02322 499 FunFam Zinc finger protein ZPR1 24 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02322 6 497 C2H2 Transcription Factor Family AT5G22480 74.848 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02322 K06874 - gmx:100798741 887.871