Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02313 ATGAAAGATGGTGGTAGGAAGCAGGGTGCACCCTCACCCTGTGCTGCATGCAAGCTCCTTCGCAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCTTATTTTCCTGCTGATGAACCCCACAAGTTTGCAAATGTCCACAGAGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGTTACCAGAGCATCAGAGGGGAGATGCAGTTAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTGTATGGGTGTGTAGGGGCCATTTCGTCTCTTCAGCAACAGATTGATGTGTTGCAGACACAATTAGCAGTGGCTCAAGCTGAAGCTGTGCACCTGAGAGTGCGCCAGAGTGCATCCCTCTACAGCCCCACTAGCCCTACCAACAGTGCCTCTCCATCATCCAAGATCATTCACTCACAAGCCAAGCCTATTTTTGACATGGACATGGACATGGTGGTGGACCAGACCACCTATGGTGATTCAATGTGGTGA 504 0.504 MKDGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQSASLYSPTSPTNSASPSSKIIHSQAKPIFDMDMDMVVDQTTYGDSMW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02313 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 135 - -
Lapu3g02313 167 Coils Coil 92 112 - -
Lapu3g02313 167 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lapu3g02313 167 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02313 Lapu-Chr3 44391143 44394102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02313 1 167 AS2 family AT1G31320 71.512 2.70e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu3g02313 LOB 6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02313 - - vum:124847068 290.041