Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02284 ATGGTTGGCGGTGGAAATGGAGAGGGAGAGGGAGCACCACCCTCGACGGCGGCGCGTCCCAGAAGTGATATCCGCCCACGCGCTTCCACGGAGAGCGTTTTCAACGGCGGGGACACCGCGGGGTATAGCCCCGGTCCCATGACTCTGCTTTCTAGCTTGTTCGGCGACGGCGATGAGTGTAAGTCGTTCTCGGAGTTCCTCGCCGGCGCCATGGTGGACCCCACCCCACCCCGGTTCTTTCTCGATTCACCTTCTCAAGGACACTTTGGAATGTCACACCAGCAAATGGTAGCACAGGTCTCATCTCTGGCTGTGCCACTCCACTCCAATGTGCAAATCCAAGCTGAATATCCATTCACTGCAGCAGTGCCTGCTACTTCATTGACACAGGTTCCTACAACTATTTCCACCACTGCACAGCAACTCATACCACTACCACCCTCAATGCCAGTTTCTGGGGTGACAGAATCCCTTGGTTTTCCTCACTCTGAACAAAAATTGCATTCTCCTTCTGTCATTGTTGATAAGCCTAATGACGATGGCTACAACTGGAGGAAGTATGGACAGAAAAATGTAAAGGGTAGTGACTTCTCTCGAAGTTATTACAAATGCACGCATCCAAATTGTCCTGTCAAGAAAAAGCTTGAGCGATCTCTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACATCCTCATCCAAGTAAGACCACAAAAGGCACCCTGACTTCAACTGAAAATTCAAATAGGTTGAAAGAAGAGATGAGTTCTCACTTGGTGTCTCAGATGGATCTAGAATCTAGTCAGGCTGAACATGGGTCTGGAACAAGTGACAGTGAGGAAGTAGGCGATCATGAAACTGAAGTGGATGAGAAAAATGATGAACCTGATCCCAAGAGGACAAACACAGAAGGCAGACTCCAGGATCCAGCCTTTTTGCATAGAACTGTGGCAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTGGATGATGGGTATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAACGGATCCTAAAGCAGTAATAACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGAGTAATAGCCACACACTTGCCAACAACAGTGCATCGCAGCTAAAAGCACAAAATGCCATACCCGATGAGAAGCATAGTTTCAGCAGCAGGGGTGTTGGGGGCAATGAGCAGCGACCTGTGGCAAGTCTAAGATTGAAGGAAGAGCAGATAACTTAG 1359 0.4798 MVGGGNGEGEGAPPSTAARPRSDIRPRASTESVFNGGDTAGYSPGPMTLLSSLFGDGDECKSFSEFLAGAMVDPTPPRFFLDSPSQGHFGMSHQQMVAQVSSLAVPLHSNVQIQAEYPFTAAVPATSLTQVPTTISTTAQQLIPLPPSMPVSGVTESLGFPHSEQKLHSPSVIVDKPNDDGYNWRKYGQKNVKGSDFSRSYYKCTHPNCPVKKKLERSLEGHVTAIIYKGEHNHQHPHPSKTTKGTLTSTENSNRLKEEMSSHLVSQMDLESSQAEHGSGTSDSEEVGDHETEVDEKNDEPDPKRTNTEGRLQDPAFLHRTVAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKSNSHTLANNSASQLKAQNAIPDEKHSFSSRGVGGNEQRPVASLRLKEEQIT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02284 452 MobiDBLite consensus disorder prediction 240 255 - -
Lapu3g02284 452 MobiDBLite consensus disorder prediction 412 436 - -
Lapu3g02284 452 SMART WRKY_cls 178 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 SMART WRKY_cls 338 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 Pfam WRKY DNA -binding domain 339 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 Pfam WRKY DNA -binding domain 179 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 ProSiteProfiles WRKY domain profile. 333 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 MobiDBLite consensus disorder prediction 265 281 - -
Lapu3g02284 452 FunFam WRKY transcription factor 165 238 - -
Lapu3g02284 452 MobiDBLite consensus disorder prediction 1 41 - -
Lapu3g02284 452 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 418 IPR044810 GO:0003700
Lapu3g02284 452 FunFam WRKY transcription factor 33 325 391 - -
Lapu3g02284 452 MobiDBLite consensus disorder prediction 412 452 - -
Lapu3g02284 452 SUPERFAMILY WRKY DNA-binding domain 330 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 ProSiteProfiles WRKY domain profile. 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 MobiDBLite consensus disorder prediction 229 313 - -
Lapu3g02284 452 SUPERFAMILY WRKY DNA-binding domain 176 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 Gene3D WRKY domain 323 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g02284 452 Gene3D WRKY domain 169 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02284 Lapu-Chr3 44032786 44035554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02284 17 452 WRKY Transcription Factor Family AT2G03340 48.456 7.64e-141 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g02284 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02284 - - vun:114179749 693.345