Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02266 ATGAGTTCGGGAAGCCACAGTGATAAGGAGAAGGAGAAGCAGAGGGTGAGTCGCACGTCGTTGATACTGTGGCACGCTCACCAAAACGACGCCGCTGCGGTGCGGAAGCTCCTGCAGGAGGATCCTTCGCTCGTTACCGCCAGGGATTACGACAACCGCACCCCGCTCCACGTCGCATCCCTCCATGGCTGGATCGACGTCGCCACTTGTTTGATCGAATTCGGCGCCGATGTCAACGCGCAAGATCGTTGGAAAAACACTCCTCTGGCGGATGCCGAAGGAGCTAAAAAGACTGACGTCATCGAGCTTTTGCAATCTCATGGAGGCTTGTCTTATGGGCAAACTGGAAGCCATTTTGATCCGAAGCCTGTTCCGCCGCCGTTGCCGAATAAGTGTGACTGGGAAATCGAACCTACCGAGCTTGACTTCTCTGACTCCGCGCGAATCGGAAAGGGGTCTTTTGGTGAGATTTTAAGAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAACGTATCCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAACATAGTTCAGTTTCTTGGAGCTGTTACAGACAGGAAGCCCCTTATGCTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCAGCAACAGCTATCAACTTTTCCATGGATATTGTGAGAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCCAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTTCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACATAGGAGATATGATAAGAAGGTTGATGTGTACTCCTTTGCGATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATCTCGAGCCTTATGATGGAGCAAAACGCGCTGCCGAGGGACACAGGCCTCAATTTCGGTCAAAGGGTTATATCAATGAGTTGCAAGATTTAACGGAGCAGTGTTGGGCGCCTGACATGAATCAGAGACCATCCTTCATAGACATCCTTAAACGTCTTGAAAAGATCAAGGAGAATTTACATTCCGATCATCACTGGCATTTGTTTGCGTCATAA 1260 0.4706 MSSGSHSDKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIDVATCLIEFGADVNAQDRWKNTPLADAEGAKKTDVIELLQSHGGLSYGQTGSHFDPKPVPPPLPNKCDWEIEPTELDFSDSARIGKGSFGEILRAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGHRPQFRSKGYINELQDLTEQCWAPDMNQRPSFIDILKRLEKIKENLHSDHHWHLFAS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02266 419 SMART ANK_2a 51 80 IPR002110 GO:0005515
Lapu3g02266 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Lapu3g02266 419 Gene3D - 2 118 IPR036770 -
Lapu3g02266 419 Gene3D Transferase(Phosphotransferase) domain 1 223 416 - -
Lapu3g02266 419 ProSiteProfiles Ankyrin repeat profile. 51 83 IPR002110 GO:0005515
Lapu3g02266 419 SUPERFAMILY Protein kinase-like (PK-like) 133 414 IPR011009 -
Lapu3g02266 419 PRINTS Tyrosine kinase catalytic domain signature 372 394 IPR001245 GO:0004672|GO:0006468
Lapu3g02266 419 PRINTS Tyrosine kinase catalytic domain signature 218 231 IPR001245 GO:0004672|GO:0006468
Lapu3g02266 419 PRINTS Tyrosine kinase catalytic domain signature 256 274 IPR001245 GO:0004672|GO:0006468
Lapu3g02266 419 FunFam Integrin-linked protein kinase family 222 417 - -
Lapu3g02266 419 Gene3D Phosphorylase Kinase; domain 1 128 222 - -
Lapu3g02266 419 SMART serkin_6 143 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02266 419 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 406 - -
Lapu3g02266 419 ProSiteProfiles Ankyrin repeat region circular profile. 51 83 - -
Lapu3g02266 419 PIRSF ILK 1 419 - -
Lapu3g02266 419 FunFam serine/threonine-protein kinase STY46-like 136 222 - -
Lapu3g02266 419 ProSiteProfiles Protein kinase domain profile. 143 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02266 419 Pfam Ankyrin repeats (3 copies) 19 82 IPR002110 GO:0005515
Lapu3g02266 419 SUPERFAMILY Ankyrin repeat 22 109 IPR036770 -
Lapu3g02266 419 ProSitePatterns Protein kinases ATP-binding region signature. 149 170 IPR017441 GO:0005524
Lapu3g02266 419 Pfam Protein tyrosine and serine/threonine kinase 147 401 IPR001245 GO:0004672|GO:0006468
Lapu3g02266 419 CDD STKc_MAP3K-like 149 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02266 Lapu-Chr3 43823834 43831690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02266 8 419 MAP Kinase Kinase Kinase AT1G14000 84.709 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lapu3g02266 PK_Tyr_Ser-Thr 2.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02266 - - gmx:100793237 783.482