Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02257 ATGTTTACAGAGACTTTCAAATACCAAGCATTGGAAGAAATCGGTCGAGGCAAATTCGCCACCGTCTTCCGCTGCTTCCACCCATCATCCAACCAATTCTACGCTCTCAAACTCATCAACAACCGCCTCCTCACCGACGCCACCGACCGCCACTGCCTTGAAATGGAGGCCAAAGTCATGACCTTCCTCTCTCCCCACCCCAACATTCTTAAAATCGTCGACGCCTTCCAGGATGCCCAAACCTCCATCATCGTTCTCCAGCTCTGCCAGCCTCGCACCCTCTTCGACCGCATCGCCGACGGCCTCTTCCGGAGCCCCACTCCGCCTCCCTCCCTAAGCAGCTCTCGAAGCTCTCACGCACCGCCACGCGCTCGGACTCGCCCACGAGACGTCAAACCCGAAAGCCTCCTGCTCGACGAAGGCAACAACCTTAAACTCTCCGACTTCGGTCCGCAGAGTGGTTCGGTGAAGGCGTAA 477 0.5723 MFTETFKYQALEEIGRGKFATVFRCFHPSSNQFYALKLINNRLLTDATDRHCLEMEAKVMTFLSPHPNILKIVDAFQDAQTSIIVLQLCQPRTLFDRIADGLFRSPTPPPSLSSSRSSHAPPRARTRPRDVKPESLLLDEGNNLKLSDFGPQSGSVKA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02257 158 SMART serkin_6 8 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02257 158 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lapu3g02257 158 MobiDBLite consensus disorder prediction 107 121 - -
Lapu3g02257 158 SUPERFAMILY Protein kinase-like (PK-like) 7 150 IPR011009 -
Lapu3g02257 158 ProSiteProfiles Protein kinase domain profile. 8 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02257 158 Pfam Protein kinase domain 8 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02257 158 Gene3D Transferase(Phosphotransferase) domain 1 46 150 - -
Lapu3g02257 158 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 99 - -
Lapu3g02257 158 Gene3D Phosphorylase Kinase; domain 1 8 89 - -
Lapu3g02257 158 MobiDBLite consensus disorder prediction 100 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02257 Lapu-Chr3 43718987 43722602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02257 8 150 EF-hand Containing Proteins AT5G12180 31.757 3.05e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu3g02257 Pkinase 9.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02257 - K08794 gmx:547573 155.221