Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02228 ATGAGCACCACTATATTGTACCCTCTTGACACTTGCACCACCAAGTTCCAATCTCAGACCTTCACTTCACCACCCAAAGTACAGGGCATTGGAACAAAGAACCTTCATTCTTTTGTTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTCAAAAAGCTCTATATGGGTAAAAGTGGTGTTAAATCCATTGGAGCCAAGGCAAACTTGGTAATTGCTGCTGTTTCCGGGGCCTGCACAGCCATTCTGACTCAACCCCTGGATACAGCCTCTTCAAGAATGCAGACAAGTGCATTTGGAAATTCTAAAGGGCTATTGAAGACCCTGGCAGAAGGCACTTGGAGTGATGCATTTGATGGCCTCAGCATTTCCTTGTTGCTGACCTCAAACCCTGCAATTCAGTATACCGTGTTTGATCAACTGAAACAAAGAGTACTGAGCAATACACTAGACAGAGATGATCCCCCGTCCCTTTCTGCATTCATGGCCTTACTTTTGGGTGTTATTTCAAAGAGTGTTGCTACTTTCCTGACATATCCTGCTATCAGGTGCAAGGTCATGATTCAAGCTGCAGACATAGATCAACCAACCTCCAAGACCAAAACAAAGAAACAATCACAGAAAACTATGTCTGAAATTCTCTGTGCAATATGGAAAAAGGAGGGCATAGTTGGATATTTCAAAGGGTTACAAGCTCAGATCTTCAAAAATGTTTTGAGAAGTCCTTTTAATGTTCAAGGAGAAGATCTCTGCATCTTCTTGGTTGCTGATTGTAGCTGTTAA 783 0.424 MSTTILYPLDTCTTKFQSQTFTSPPKVQGIGTKNLHSFVSQFVYFYGYSYFKKLYMGKSGVKSIGAKANLVIAAVSGACTAILTQPLDTASSRMQTSAFGNSKGLLKTLAEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRVLSNTLDRDDPPSLSAFMALLLGVISKSVATFLTYPAIRCKVMIQAADIDQPTSKTKTKKQSQKTMSEILCAIWKKEGIVGYFKGLQAQIFKNVLRSPFNVQGEDLCIFLVADCSC* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02228 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 144 IPR018108 -
Lapu3g02228 260 Gene3D Mitochondrial carrier domain 1 245 IPR023395 -
Lapu3g02228 260 SUPERFAMILY Mitochondrial carrier 2 238 IPR023395 -
Lapu3g02228 260 Pfam Mitochondrial carrier protein 64 146 IPR018108 -
Lapu3g02228 260 Pfam Mitochondrial carrier protein 158 240 IPR018108 -
Lapu3g02228 260 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 28 241 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lapu3g02228 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 158 254 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02228 Lapu-Chr3 43209972 43211685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02228 43 236 Chloroplast and Mitochondria Gene Families AT1G25380 25.243 1.86e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02228 - - ccaj:109790003 346.665