Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02214 ATGAAGAACCTGAGGGTTTGTTTAACTTACTTGTTTCCTACAATCATTCTTGTTCTGCTTACTCCTTCCTCGGTTGCACAGCTATCACAAAGTGAGAATAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTTCAAGGGTGGACAAGATGGACCAACTTGTGCTTCCTCCCTCCCTCTTCTTCCCTCAAGATAGTTTGCTCAAATGGCCATGTCACAGAACTAACCATCATTGGAAACAAGACCTCCCCATCTTCACACATCCCCAAGGCAGGTTCCTGGACTTCCCTTCAAACACTTTCACGAAAATTCTCCATCGATTCTTTCTTCACTGTCATGACAAAGCTTTCAAATTTGAAGGTGTTGTCCTTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGCCAAAATCAACAGGTTTTGGTCTTTGGAAGTGCTAAACATTAGCTCAAATTTCATCTATGGGGAAATTCCATCTTCTCTATCCTCAATGAGAAATCTAAGGAGTCTTGTTTTGGTTAATAATCTCTTCAATGGAAGTGTCCCTGATCTCCAAAGTTTAAATTCTCTTGAAGAGCTCAACTTGGGAGGTAACAAACTGGGTCCTGAATTCCCTTCAGTGGGAAAGAATCTTGTCACAGTTATCTTGAGAAATAATTCACTGAGATCTCATATTCCTCCACAAATTATGCACTTTGACAAACTTCAGGTATTTGATGTCTCTTCCAATGAATTTTTTGGAAACATCCCGTCCTATTTGATGTCCATGCCTTCCCTTCATTACCTAAACTTGGCCGCAAACCATCTAAGTGGAAACCTCTCAGTGAATATGGCATGTAGTCCTTCACTAACATTTGTGGACATCTCACACAACCTTCTGGTTGGAAAATTGCCAGCCTGCCTTGATTCAATTTCTTCAAAGGCCACAGTACTATATTCTGGAAATTGTTTGTCAACCAAAAGGTTAAATAATCAGCAACATCCATCTTCTTTTTGCAAGAGAGAGGGAGCTTTGGCTGTTAAGCCTCCGGCTAAAAAGCTGAAGAATGAATCAAATTCGGGTATTAAACTAGGCCTAGTGATTGGAATAATTGGAGGAGCTGTAGTAATTGCTGGACTTCTGGTTCTTCTCATTGTGTTCATCTTTAGAAAGTCCAATGGAGAAAGCTCACATCATAGAATGGACAAATCTGTTGCTAATAAATATTCTGCCAGTGCATCTCCTAGACCAAACGGCACAAGACATATTCCTCAGGCAATGAAGCAAGCAGCACTTGGACTTCCACCATACCGTATTTTCACATCAGAGGAAATTGAAGATGCAACAAATAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAAGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTAGTTAATTGTGTTAAAATAAGGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAATAGAGGTATTACCCAATTTGAGGCACAGGCATATGGTGAGTGTTCTAGGACACTGTATCATTACTGAACAGGATCATCCCCAAACAACAAGCACAGTCTTCATCGTATTTGAGCACATCTCAAATGTGTCATTGAGGGATCAACTTGCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCTCAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTCCAGTTCTTACACACAGGAGTTGCTCCTGGCATATATGGCAACAATTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGCAGATACAGCATTCCATTGCCATCCAAGAGTGCACATAATGAACACACTGGCACCAATCATATTGGCAGCACAAATAATGCAGAAAAGGAAGACATCTATCAGCTGGGAGTTATTCTTCTTGAAGTTATCACTGGCAAACAAATTGCTTCCCCGAGTGAAATAGAGGAGATGAAGGATGAGCTGGAGAATGGTTCCTCAGAAGCAACATCAGTAATTAAAAGCGTGATTGATCCTTCACTGCGGGGAACTTACGCGTATGAATCAATGAAGACTGCAGTTCAGATTACCATAAACTGTCTCTCCAAGGTTTCTAGCCAGCGTCCTTCAATAGAGGATGTTCTTTGGAATTTACAATACTCAATGCAAGTTCAAGAGTCATGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2211 0.4111 MKNLRVCLTYLFPTIILVLLTPSSVAQLSQSENRILFQVQKLLEYPQALQGWTRWTNLCFLPPSSSLKIVCSNGHVTELTIIGNKTSPSSHIPKAGSWTSLQTLSRKFSIDSFFTVMTKLSNLKVLSLVSLGLWGPLPAKINRFWSLEVLNISSNFIYGEIPSSLSSMRNLRSLVLVNNLFNGSVPDLQSLNSLEELNLGGNKLGPEFPSVGKNLVTVILRNNSLRSHIPPQIMHFDKLQVFDVSSNEFFGNIPSYLMSMPSLHYLNLAANHLSGNLSVNMACSPSLTFVDISHNLLVGKLPACLDSISSKATVLYSGNCLSTKRLNNQQHPSSFCKREGALAVKPPAKKLKNESNSGIKLGLVIGIIGGAVVIAGLLVLLIVFIFRKSNGESSHHRMDKSVANKYSASASPRPNGTRHIPQAMKQAALGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVNCVKIRQKGLPHSIMQQIEVLPNLRHRHMVSVLGHCIITEQDHPQTTSTVFIVFEHISNVSLRDQLADGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYSIPLPSKSAHNEHTGTNHIGSTNNAEKEDIYQLGVILLEVITGKQIASPSEIEEMKDELENGSSEATSVIKSVIDPSLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYSMQVQESWTSSGNLSTKL* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02214 736 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 211 - -
Lapu3g02214 736 SUPERFAMILY L domain-like 30 322 - -
Lapu3g02214 736 Gene3D Transferase(Phosphotransferase) domain 1 533 731 - -
Lapu3g02214 736 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 422 522 - -
Lapu3g02214 736 ProSiteProfiles Protein kinase domain profile. 449 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02214 736 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 533 732 - -
Lapu3g02214 736 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 212 321 - -
Lapu3g02214 736 Gene3D Phosphorylase Kinase; domain 1 416 520 - -
Lapu3g02214 736 Gene3D Ribonuclease Inhibitor 215 342 IPR032675 -
Lapu3g02214 736 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 717 - -
Lapu3g02214 736 Gene3D Ribonuclease Inhibitor 29 214 IPR032675 -
Lapu3g02214 736 SUPERFAMILY Protein kinase-like (PK-like) 430 716 IPR011009 -
Lapu3g02214 736 Pfam Protein kinase domain 455 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02214 Lapu-Chr3 42853987 42857779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02214 24 694 Miscellaneous Gene Families AT2G02780 48.555 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu3g02214 Pkinase 3.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02214 - - gmx:100803061 1214.91