Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02186 ATGGGAATGGCGAAGAGTGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTTATGCGATGAGGGTGAAGATTGCCCTGAACATGAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGATCTTCTTCTTCAGTCTAACCCTGTGTATGGCAAAGTCCCAGTTCTCTTCCACCATGGCAGACCCATCTGTGAGTCTTTGATCATAGTAGAATACATAGATGAAACATGGTCCACTGCTCCTTCTATTCTCTCCTCTGATCCTTATGATAGAGCTCTTGCTCGCTTCTGGGCTTCTTACATAGATCATAAATGGTTTCCTTCCATGAAAAGCATTATGACTGTTGAAAGAGAGGAGGAAAGGAAGCCATATTTTGAGGTGTTGGAAGAGGTACTTGAGAGGATGGAGGATGCTTTCTGGAAATGCAGCAAAGGAAAGCCATTTTTTGCAGGAGACAGGATTGGATTCCTTGATATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTGTCATAGAACAAAGGTATGAAAGGAAACTGCTGGTTGAAGCAAAGACTCCTGCTTTGGTGAAATGGGCTGAGAAATTTGCTGCTGACCCTGCTGTGAAGGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCTATTGGCAAGAACTAG 702 0.4416 MGMAKSELKVIGKWSSPYAMRVKIALNMKALEHEHFEETLNPKSDLLLQSNPVYGKVPVLFHHGRPICESLIIVEYIDETWSTAPSILSSDPYDRALARFWASYIDHKWFPSMKSIMTVEREEERKPYFEVLEEVLERMEDAFWKCSKGKPFFAGDRIGFLDIAFGCFLGWLSVIEQRYERKLLVEAKTPALVKWAEKFAADPAVKGLIPETDKLVEISKSLQIKWRAAIGKN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02186 233 Pfam Glutathione S-transferase, C-terminal domain 101 203 IPR004046 -
Lapu3g02186 233 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Lapu3g02186 233 FunFam Glutathione S-transferase GSTU6 3 88 - -
Lapu3g02186 233 CDD GST_N_Tau 8 81 - -
Lapu3g02186 233 SFLD Main.3: Omega- and Tau-like 4 227 IPR045073 -
Lapu3g02186 233 SUPERFAMILY GST C-terminal domain-like 88 220 IPR036282 -
Lapu3g02186 233 SFLD Glutathione Transferase (cytosolic) 4 227 IPR040079 -
Lapu3g02186 233 FunFam Glutathione S-transferase U9 88 229 - -
Lapu3g02186 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 217 IPR045073 -
Lapu3g02186 233 Gene3D - 88 230 - -
Lapu3g02186 233 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lapu3g02186 233 CDD GST_C_Tau 92 220 IPR045074 GO:0004364|GO:0006749
Lapu3g02186 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lapu3g02186 233 Gene3D Glutaredoxin 1 87 - -
Lapu3g02186 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02186 Lapu-Chr3 42459764 42461485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02186 3 222 Glutathione S-transferase Gene Family AT1G10370 57.466 1.43e-89 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02186 K00799 - cam:101508281 366.311