Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02185 ATGAAGAGTGAGGTGAAGTTGTTGGGAGCATGGCCAAGTCCATACGTGTTGAGGGTTCGCATAGCTCTAAACATGAAATCAGTGGAGTATGAATACCATGAAGAAAAGTTACCGTCCAAAAGCCACCTTCTCCTTCAATCCAACCCCATTTACAAGAAAATCCCTGTTCTCATCCATAAGGACAAACCCCTCTGCGAGTCTTTGATCATTGTGCAGTATGTGGATGATGTTTGGTCCTCTGCAACTCCCATTCTCCCCTCTGATCCTTACGAACGCGCCACTGCTCGTTTCTGGGCTATCTATATTGATCAAACGTTGTACCCGACCCTGAAATCCATTAGAGGAGCTTCAGAAGAGGATGAGAAGAAGAAATTGGTAGAGGAGGTGAGAAAAGGATTGGCATTGTTGGAGGACGTGTTTAAAAATAGCAGCAAAGGCAAGGGCTTTTATGGTGGTGACCAAATAGGGTTGTTGGACATTGCACTTGGTAGCTTCTTGGGGTGGCTGAGGGTGGTTGAGATAATCAATGGGGTGAAGTTGCTTGACCAAAGCAACACACCTGAGCTGCTGAAATGGGCTGAAAGGTTTTGTGCAGATGTTGCTGTCAAAGATGTTATGCCAGAGACAGGGAGGCTTGTTGAGTTTTCCAAAACTCTACCTAAGGGCTAA 669 0.4574 MKSEVKLLGAWPSPYVLRVRIALNMKSVEYEYHEEKLPSKSHLLLQSNPIYKKIPVLIHKDKPLCESLIIVQYVDDVWSSATPILPSDPYERATARFWAIYIDQTLYPTLKSIRGASEEDEKKKLVEEVRKGLALLEDVFKNSSKGKGFYGGDQIGLLDIALGSFLGWLRVVEIINGVKLLDQSNTPELLKWAERFCADVAVKDVMPETGRLVEFSKTLPKG* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02185 222 CDD GST_C_Tau 89 219 IPR045074 GO:0004364|GO:0006749
Lapu3g02185 222 Gene3D Glutaredoxin 1 84 - -
Lapu3g02185 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Lapu3g02185 222 Pfam Glutathione S-transferase, C-terminal domain 97 198 IPR004046 -
Lapu3g02185 222 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Lapu3g02185 222 CDD GST_N_Tau 5 78 - -
Lapu3g02185 222 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Lapu3g02185 222 Gene3D - 85 221 - -
Lapu3g02185 222 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lapu3g02185 222 FunFam Glutathione S-transferase U9 85 221 - -
Lapu3g02185 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 210 IPR045073 -
Lapu3g02185 222 FunFam Glutathione S-transferase GSTU6 1 85 - -
Lapu3g02185 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lapu3g02185 222 SUPERFAMILY GST C-terminal domain-like 84 218 IPR036282 -
Lapu3g02185 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 222 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02185 Lapu-Chr3 42445739 42452678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02185 3 219 Glutathione S-transferase Gene Family AT1G10370 58.716 3.97e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02185 K00799 - gmx:121173931 312.383