Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02168 ATGACCCTGCAAGCTGACTCAGCATCACCATCACCACCACCTGATTCTGCAACAACCAACGGCGTCGTCCCCATCTTAGAGGAAATTCCACAGCCACAGCCAACGTCACCGTCGCCGCCGCCAGAACTGCGTCTACCAATATGGTGGCCGGAAGATGGAAATCTCAGCATGGATTGGGTAGAGAACCTGATGTTGTGCTTCGATTGGTGTTCTCGGAACCTCCCTCCGTCAGAGTTACCTTCGGTTCTCCCCGTCAAAGTCTTCGACTCGCTCATCCTCATCGCCTCCAAGATGCTCCACAAGGAACCCAACTGCGTCACCATAGACCCCTTTCGCCCTAGCCCCGACGATAAATCTCCCTCCGCCGCTTCCGTCGCTGTCGTCGGCGACGTTCACGGACAACTCCATGATCTTCTCTTCCTCCTCCGAGATGCTGGCTTCCCCTCCCGAGATCGAATCTTTGTCTTCAACGGGGATTACGTGGATCGAGGAGCGTGGGGCCTCGAAACCTTCTTGCTGTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATCTGCTACGCGGGAATCATGAATCAAAATACTGTACCTCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCACGTGTACAGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACGGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCATCAAAGAGGTTTAAAGGAAAGAAGAACCGTAAGATTAATGTTAATCATGATAGCAAAATTCTATCTCTTGGTTCCTTGGAAGAATTGTCCAAGGCTCGACGATCAGTTCTTGATCCTCCTTGGGAAGGTCTAAATTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCAAAAACTCTGGGTCTTGCTCCAAATAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAGCACCAACTAAAGTTGATCATCAGGTCACATGAAGGCCCTGATGCAAGGGAGAAAAGGGATGGTCTGGATGGAATGGATGAAGGTTACACCATTGACCATACTGTAGAGTCTGGAAAGCTGGTCACAGTGTTTAGTGCTCCAGATTACCCACAGTTTCAGGCAACAGAGGAGAGGTATAACAACAAAGGTTCCTACGTTGTCCTTGAGCCCCCGAATTTTGAGAATCCTATATTTCATGGATTTTCAGCAGTTACTCCCAGGCCGAAGGTGGATGCCTACTACGACTACGAAGAGGTGATAGACTCCGATGAAGAATTGGACTTGGCCTCCATGGTAACTTCCTGA 1362 0.4802 MTLQADSASPSPPPDSATTNGVVPILEEIPQPQPTSPSPPPELRLPIWWPEDGNLSMDWVENLMLCFDWCSRNLPPSELPSVLPVKVFDSLILIASKMLHKEPNCVTIDPFRPSPDDKSPSAASVAVVGDVHGQLHDLLFLLRDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRFKGKKNRKINVNHDSKILSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSKTLGLAPNKERGIGLLWGPDCTEEFLKKHQLKLIIRSHEGPDAREKRDGLDGMDEGYTIDHTVESGKLVTVFSAPDYPQFQATEERYNNKGSYVVLEPPNFENPIFHGFSAVTPRPKVDAYYDYEEVIDSDEELDLASMVTS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02168 453 ProSitePatterns Serine/threonine specific protein phosphatases signature. 188 193 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 187 211 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 224 250 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 284 311 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 124 151 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 154 181 IPR006186 GO:0016787
Lapu3g02168 453 PRINTS Serine/threonine phosphatase family signature 378 394 IPR006186 GO:0016787
Lapu3g02168 453 MobiDBLite consensus disorder prediction 1 43 - -
Lapu3g02168 453 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 450 - -
Lapu3g02168 453 SMART pp2a_7 83 424 IPR006186 GO:0016787
Lapu3g02168 453 CDD MPP_PP7 49 434 IPR041754 -
Lapu3g02168 453 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g02168 453 FunFam Serine/threonine-protein phosphatase 67 448 - -
Lapu3g02168 453 Gene3D - 78 442 IPR029052 -
Lapu3g02168 453 SUPERFAMILY Metallo-dependent phosphatases 79 427 IPR029052 -
Lapu3g02168 453 Pfam Calcineurin-like phosphoesterase 124 352 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02168 Lapu-Chr3 42132233 42139278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02168 46 344 Calmodulin-binding Proteins AT5G63870 70.000 5.43e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02168 K04460 - gmx:100810695 815.839