Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02159 ATGATGCTTCAACCGTGCCCTTTAATGATCCTTCTTTTTGTTTTACTTCTTCACAGTTTCTCAATACCAACCTGTCATTGCCAAACCCCCAGTTCTCCTCCTCAGAACATTGAAACTTTCTATCCAAATCAAACTTCAGCTGCACAACAACCCGAGAAATCACCACAGCCACAACAACCACCCTCACTACCAACTGGTAACACATCACCTAGCCGTGGTTCTTCCAGTGGTAAGATAGCCAAGGCGGTGGCTGGAACTGCAGCCAGCACCATAGTTGTTTGTGGTTTAATTTTCTTTTTGGCGCAAAGGTTCTTGAGGGCCAGAAAGAGAAAGAAAGAGGTGTTAAGTAACACTGCTTCTGGTGGAGATAACCGTGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTTAAGGGGTTGATTGTGGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAGAACTCTAACAAGGATCTACATAAGGAGGTTTTGAGTAGTCCCAGAAACAAAGAAAAAGAAGATGATGAAAATCATGTGAAGAAGTCCAAGTCCATCCAAGAAGTTCCTCTCCTTAGAGGGAAATCTTCAACTTCTCACTTGAATGTATCTCCAGAAGAGGATGAGCCATACAGATTTTCACCAATTTCTTCTCCTCCTCCTGCTTCTGTTTCTGCTCCTACTCCTTCTAGTCTTCCTTCATCAGTAGGGGTTGTTATCAAGGGTGATCAGAAACCAGACTCTCCAATTCAACCATCAACTCCACCCCCTCCAGTTTCACCATCAACACCTTCATCCTCTACTTCTATTTCAGCAGTTCCGAAAGCGAATAATCCTGCCCCGGCACCTCCCCCTCCCCCAATCCCAGCCAAAAGGAGTCCAGCACCACCTCCTCCTCCTCCTGCAGCCTCATCAAAACCACCACCTGCTCCTATTGAAATTTCAGCTATTAAGCAAAGAAATTCTTCAGGAAAAGGCATCCCAGAAACCAGCAATGACCAAGTGAAGCTGAAGCCCCTGCATTGGGATAAGGTGAATACTAATAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGGGTTGATCAAGATCTCATGGAAGCTCTCTTCGGTTATGTCGCGACCAACCGGAGATCTCCCAAAGGAAAAAGTCTCTCAGCCATTCCAAGCAAGGATGCCTCAGCTTCATCAGCAAAAATTTTCCTTCTTGACCCGAGAAAATCACAGAACATTGCTATTGTTCTCAAATCTCTTGCAGTCTCCCTAGGTGAAATTGTAGATGCACTCACTGATGGAAAGGGCCTCAAACCAGATACTCTTGAAAAGCTTGCTAGAGTTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTGAATACAAAGGAGACCCGGCAAGACTTGCAGCAGCTGAATCTTTCCTTTATAATATCCTCAAAGCTGTTCCCTCAGCTTTTAAGCGCTTGAATGCCGTGCTATTCAGGTTGAACTACGACTCTGAGATTCAAGAAACCAAGGAATCTCTGCAGACCATTGAATTGGGTTGTAAGGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTCAAGGCAGGAAACAGAATGAATGCAGGAACAGCAAGGGGCAATGCACAAGCTTTCAATTTGTCTTCTCTAAGGAAACTCTCTGATGTTAAGAGCACCGATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTGCTGAGGGAAAACGGGTTGCTCTTAACCGCAATGGCAGCCTGAGAAGTAGTAGCAGTAGGAGCAGCAGCAGTAGCAATGGAAACTATGAGAACAATGCTGCTTCAAATGAACTGATAGAAAGGGAATATATGACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTACAACAATTTAGTTGGTTCGATCTCAGCCCTCTCAAACCGGTTAGTCAAAGTTCAAGAACTGGTTTCCTTGTGTGGAAAAAGTGAAGGGGGACATTTTAAAAGAGAAATGGATCATTTTCTTGAAAATGCTGAGGAAGAGCTGAAACTATTGATGGAGAAGCAAACAAGTGTATTGCAGCTTATCAAGAAAACAACACAGTACTATCAAGGAGGAGCTTCAAAAGAAACTGCAGAAGACAATCTTCAATTGTTCGTCATAGTGAAGGATTTTCTGGGAATGGTTGATCAAACTTGCATTGAGATTGCACGTGACATGCAGAAGAGGAAACTTCCTCCTAAGGCAATATTTGGGTAG 2334 0.4357 MMLQPCPLMILLFVLLLHSFSIPTCHCQTPSSPPQNIETFYPNQTSAAQQPEKSPQPQQPPSLPTGNTSPSRGSSSGKIAKAVAGTAASTIVVCGLIFFLAQRFLRARKRKKEVLSNTASGGDNRVVPQGNVFERIDGNVKGLIVDEDGLDVIYWRKLEGKNSNKDLHKEVLSSPRNKEKEDDENHVKKSKSIQEVPLLRGKSSTSHLNVSPEEDEPYRFSPISSPPPASVSAPTPSSLPSSVGVVIKGDQKPDSPIQPSTPPPPVSPSTPSSSTSISAVPKANNPAPAPPPPPIPAKRSPAPPPPPPAASSKPPPAPIEISAIKQRNSSGKGIPETSNDQVKLKPLHWDKVNTNNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSLSAIPSKDASASSAKIFLLDPRKSQNIAIVLKSLAVSLGEIVDALTDGKGLKPDTLEKLARVSPTEEEQSLILEYKGDPARLAAAESFLYNILKAVPSAFKRLNAVLFRLNYDSEIQETKESLQTIELGCKELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLSSLRKLSDVKSTDGKTTLLHFVVEEVVRAEGKRVALNRNGSLRSSSSRSSSSSNGNYENNAASNELIEREYMTLGLPIVGGISSELSNVKKAAQIDYNNLVGSISALSNRLVKVQELVSLCGKSEGGHFKREMDHFLENAEEELKLLMEKQTSVLQLIKKTTQYYQGGASKETAEDNLQLFVIVKDFLGMVDQTCIEIARDMQKRKLPPKAIFG* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02159 777 SMART it6_source 334 769 IPR015425 -
Lapu3g02159 777 ProSiteProfiles Formin homology-2 (FH2) domain profile. 334 777 IPR015425 -
Lapu3g02159 777 SUPERFAMILY Formin homology 2 domain (FH2 domain) 347 769 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 197 211 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 166 195 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 166 318 - -
Lapu3g02159 777 Pfam Formin Homology 2 Domain 338 754 IPR015425 -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 45 77 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 284 315 - -
Lapu3g02159 777 Coils Coil 693 720 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 256 270 - -
Lapu3g02159 777 Gene3D Formin, FH2 domain 354 773 IPR042201 -
Lapu3g02159 777 PANTHER FORMIN-RELATED 12 765 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu3g02159 777 Coils Coil 512 532 - -
Lapu3g02159 777 MobiDBLite consensus disorder prediction 601 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02159 Lapu-Chr3 41937390 41940768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02159 1 770 FH2 protein (formin) Gene Family AT1G70140 44.277 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02159 - - gmx:100783219 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02159 3 41937390 41940768 Lapu3g02159 3 41937390 41940768 ECH
Lapu2g00499 2 4222416 4227753 Lapu3g02159 3 41937390 41940768 PCT