Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02143 ATGGGTAGTAGTGACATGGACAAAACCCCAAAAGAGAAGGAGTCTAAGACAGTTCCAGCTACATCACAGGAGCAGTCTCCAACAGCTGGCATGGCGACTATTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCCATACCTCCACACGGTTTCTTGGCATCAAGTCCCCAAACCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCTCCACATCCGTATGTAGCAATGTATCCCCATGGTGGCATTTATGCTCATCCATCCATTCCTCCGGGGTCATATCCTTTCAGTCCTTTTGCAATGACTTCTCCAAATGGTATTGCGGATACTTCAGGAAATACCCAAGGCAGTGTTGAAGTTGGTGCTAAAGCTCCCGAGGTGAAGGAAAAGTTACCAATCAAAAGATCAAAAGGAAGTGCAAGTGGGGGTAATTTGAATATGTGGATTACAGGAAAAAATAATGAACTTGGTAAAACAACCGGAGAATCTGCTAATGGTATTCATTCCAAAAGTGGTGAGAGTGCAAGTGACGGAACCAGTGAAGGAAGTGATGAGAATTCCCAGAATGATTCTCAATTGAAATCTGGGGAGAGGCAGGAATCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCGGTACATGCTCTTCAAAATGGGGTACATAGTAGACCACAGACACTTGTTAACCAAACTATGCCTACCATACCTATATCTACTGCGAGTGCTCCTGGAGCAGTTCCTGGTCCCACAACTAATTTAAACATAGGAATGGACTATTGGGGCACGCCAACTTCATCTGCCATTCCTGCACTGCATGGAAAGGTTTCTTCTACTGCAGTTGCTGGAGGGATGATTACTGCTGGATCACGAGATGGTGTACAGTCACAAATTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCTGAATGCGATGAACTAGCTCAGCGTGCTGAAGCTTTGAAAGAAGAAAATGCCACTCTCCGATCAGAAGTAAGCAGGATCAGGAGTGAGTACGAGCAGCTACTTTCCGAAAATGCTTCCCTTAAGGAGAGACTTGGGGAGATACCTGGTGTTGCTACGCCTGGGAACGAGGATGTTAGGTCTGGCCAGAATGATCAGCATGTTAGTAATGACACTCAACAAAGTCGTCAGAAAGAGGCTGTGCAGGGTGTTCATTAG 1254 0.4577 MGSSDMDKTPKEKESKTVPATSQEQSPTAGMATINPDWSNFQTYSPIPPHGFLASSPQTHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMTSPNGIADTSGNTQGSVEVGAKAPEVKEKLPIKRSKGSASGGNLNMWITGKNNELGKTTGESANGIHSKSGESASDGTSEGSDENSQNDSQLKSGERQESFEDEPSQNGSSVHALQNGVHSRPQTLVNQTMPTIPISTASAPGAVPGPTTNLNIGMDYWGTPTSSAIPALHGKVSSTAVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSRIRSEYEQLLSENASLKERLGEIPGVATPGNEDVRSGQNDQHVSNDTQQSRQKEAVQGVH* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02143 417 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lapu3g02143 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Lapu3g02143 417 MobiDBLite consensus disorder prediction 138 221 - -
Lapu3g02143 417 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Lapu3g02143 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 409 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lapu3g02143 417 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Lapu3g02143 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Lapu3g02143 417 Gene3D - 311 365 - -
Lapu3g02143 417 Coils Coil 328 376 - -
Lapu3g02143 417 Pfam Disordered region downstream of MFMR 135 275 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 372 417 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 19 40 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 145 201 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g02143 417 SUPERFAMILY Leucine zipper domain 311 367 IPR046347 GO:0003700|GO:0006355
Lapu3g02143 417 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Lapu3g02143 417 MobiDBLite consensus disorder prediction 310 331 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 1 40 - -
Lapu3g02143 417 MobiDBLite consensus disorder prediction 389 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02143 Lapu-Chr3 41652147 41659646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02143 1 381 bZIP Transcription Factor Family AT2G35530 63.590 9.92e-162 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g02143 MFMR_assoc 2.6e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02143 K09060 - gmx:100101912 768.844