Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02134 ATGGAGAAACTGAAAGTATCTACAAAGCATGATTCTGATGGCAGCAGTGATCAGGCAGATTCATTTCCAATATTCGAATTGCGTGAGAGTCAAAATGTTGGACAGCAGAGGATCAGAAGAGAGGAAGATGATACAAAAGCTGTGAGATTGGATGGAGGTTCTGCAATTGCTTCCTCTAATTCTGCAAGCAATAAGGAATCTGCCAACAAGTGGATGGCATTTGCTAGGAAGCCTGGTTTTGCAGTTGATGGAAACTCAGCAATAAAGGATAAAAGTACTTCCGAAGACAATCCCTTGAGGAATCATTTAAAAGAGAAGTCCTCTTCTGATCAACAAATTTTAACTGAAGCAACCATAGCTGAGAGAACTGCTGAATGGGGTCTTGTGGTGAACTCTGGGAACTTCAAGGCAATGGGGGGAGAAAATACTAGTGCCTCTTTTGATGGTGACAGAAGCAGAAACTTGTCAGATAGATTTGCTGAATCAACTCGGACTTCTGGGGAGTCAAATTTTGGATCTGAGTCATCATCAGGGGTGTTCCCAAGGGTGTCACAAGAGTTGAAGGAAGCATTGGCGACGCTGCAACAGACGTTTGTTGTCTCTGATGCTACTAAACCAGACTGCCCAATCATGTATGCCAGCAGTGGCTTTTTCACTATGACTGGCTATTCTTCAAAGGAGATTATTGGAAGGAACTGTCGATTTCTTCAGGGGCCTGAGACAGACAAGAATGAAGTTGCGAAAATTCGGGATGCAGTTAGAAATGGGAGAAGTTATTGTGGCAGACTATTAAACTACAAGAAAAATGGAACTCCATTCTGGAATCTTCTCACTGTTACCCCCATCAAAGATGACCGTGGCAATACTATCAAATTCATCGGAATGCAGGTTGAGGTGAGCAAGTACACCGAGGGCGTGAATGAAAAGGCATTACGACCAAATGGATTACCCAAGTCATTAATTCGATATGATGCACGTCAAAAGGAGAAAGCTCTGGGTTCCATCACCGAGGTTGTCCAAACTGTTAAGGACCCAAAATCTATTATTAATAATAGGAATCATGATACTGCTTCCATGCAAGAAGAGGAAGAGAAAATCAATCTTGATTTTGTTTTGCCAAAGTCTGCTGATGCTGGGAATACAAGCACACCTGCTAGACAACCTTCTCCACTTAACATCCAACGCATGAGTTCTAATCAGGAAAAGAGTAGGACATCACGTTCAGGACGGATTTCTTTCAAGGGTTTTAAAGGGAAATCTCAGAGTTCTGCTGGGAGAGATGAGGAGAAGTCCATTGTTGAACCTGAGGTTATGATGACCAAAGAAATAGAGTGGTCGAACAATTGGGAGCACTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTTGCAACCACATTGGAGCGGATAGAAAAGAACTTCGTGATTTCTGATCCTAGACTGCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGATCAGGCAACTGTTTCCAGGATAAGGGATGCTATCAGAGAACAGAGGGAAATAACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAAAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGCGTTCAACTGGATGGAAGTGATCATGTGGAACCCTTAAAAAACCGCCTGTCTGAGACAACTGAGCTACAAAGTGCTAAGTTGGTGAAAGCCACTGCAGAAAATGTCGATGAAGCTGTCCGAGAACTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCTGTCTTTCCACGACCTCACAAAAAGGACAATCCTTCTTGGGTAGCAATACAAAAGGTAGTTGCTAGAGGCGAAAAAATTGGCCTGCAACATTTTGTGCCCATAAGGCCACTAGGTTGTGGAGATACTGGCAGTGTCCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAAGCGATGGAGAAGTCTGTCATGCTAAATCGTAATAAGGTTCACCGATCATGCATTGAAAGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAACACTGTACACCTCATTTCAGACTTCTACACATGTATGTTTGATTTCTGACTTCTGTCACGGGGGAGAATTGTTTGCATTGCTTGACAAACAACCAATGAAGATTTTCAAAGAAGAATCAGCAAGATTCTATGCGGCAGAGGTTGTCATTGGTTTGGAATATCTCCACTGTCTCGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTACTTCAGAAGGATGGCCATGTTGTATTAACTGATTTTGATCTATCATCTATGACATTGTGTAAGCCCCAGGTTGTGAAGCAAGCATTACCTGGTAAAAGAAGATCACGAAGTGAACCGCCACCAGTACTTGTTGCAGAGCCAGCTACACAATCAAACTCATTTGTTGGAACTGAAGAATATATTGCCCCTGAAATTATAACTGGAGCTGGGCATACAAGTGCTATAGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTCTATGGTCGAACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCTAACATCTTACACAAGGATCTTACCTTCCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTAATTAATGCACTATTGCAAAGAGACCCAACAAGTCGTCTAGGTTCAACCACTGGTGCAAACGAAATCAAACAACATCCTTTTTTCCGTGGCATCAATTGGCCTCTAATCCGCAACATGACTCCACCCCCATTAGATGTTCCTCTAAAATTGATAGGAAAAGATCCATTGGCAAAGGATATAAAGTGGGAAGATGATGGGGTGCTAGCTAGCTCGATTGATATGGATATTTTTTGA 2991 0.4199 MEKLKVSTKHDSDGSSDQADSFPIFELRESQNVGQQRIRREEDDTKAVRLDGGSAIASSNSASNKESANKWMAFARKPGFAVDGNSAIKDKSTSEDNPLRNHLKEKSSSDQQILTEATIAERTAEWGLVVNSGNFKAMGGENTSASFDGDRSRNLSDRFAESTRTSGESNFGSESSSGVFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQGPETDKNEVAKIRDAVRNGRSYCGRLLNYKKNGTPFWNLLTVTPIKDDRGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVKDPKSIINNRNHDTASMQEEEEKINLDFVLPKSADAGNTSTPARQPSPLNIQRMSSNQEKSRTSRSGRISFKGFKGKSQSSAGRDEEKSIVEPEVMMTKEIEWSNNWEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSRIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETTELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKDNPSWVAIQKVVARGEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSVMLNRNKVHRSCIEREIISLLDHPFLPTLYTSFQTSTHVCLISDFCHGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSSMTLCKPQVVKQALPGKRRSRSEPPPVLVAEPATQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRLGSTTGANEIKQHPFFRGINWPLIRNMTPPPLDVPLKLIGKDPLAKDIKWEDDGVLASSIDMDIF* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02134 996 SMART pac_2 537 579 IPR001610 -
Lapu3g02134 996 SMART pac_2 260 302 IPR001610 -
Lapu3g02134 996 Pfam Protein kinase domain 664 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02134 996 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524
Lapu3g02134 996 MobiDBLite consensus disorder prediction 373 432 - -
Lapu3g02134 996 FunFam Putative LOV domain-containing protein 197 353 - -
Lapu3g02134 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 479 575 IPR035965 -
Lapu3g02134 996 SMART serkin_6 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02134 996 NCBIfam PAS domain S-box protein 209 300 IPR000014 -
Lapu3g02134 996 NCBIfam PAS domain S-box protein 486 577 IPR000014 -
Lapu3g02134 996 Gene3D PAS domain 197 368 - -
Lapu3g02134 996 ProSiteProfiles PAC domain profile. 257 311 IPR000700 -
Lapu3g02134 996 FunFam Putative LOV domain-containing protein 745 959 - -
Lapu3g02134 996 Gene3D Phosphorylase Kinase; domain 1 660 744 - -
Lapu3g02134 996 CDD PAS 483 575 IPR000014 -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 1 16 - -
Lapu3g02134 996 SMART pas_2 185 254 IPR000014 -
Lapu3g02134 996 SMART pas_2 462 531 IPR000014 -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 159 178 - -
Lapu3g02134 996 ProSiteProfiles PAC domain profile. 534 588 IPR000700 -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 1 69 - -
Lapu3g02134 996 Gene3D Transferase(Phosphotransferase) domain 1 745 962 - -
Lapu3g02134 996 ProSiteProfiles Protein kinase domain profile. 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02134 996 ProSiteProfiles PAS repeat profile. 460 533 IPR000014 -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 54 68 - -
Lapu3g02134 996 ProSiteProfiles PAS repeat profile. 183 256 IPR000014 -
Lapu3g02134 996 FunFam LOV domain-containing protein 660 744 - -
Lapu3g02134 996 Gene3D PAS domain 450 613 - -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 82 112 - -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 33 49 - -
Lapu3g02134 996 SUPERFAMILY Protein kinase-like (PK-like) 639 970 IPR011009 -
Lapu3g02134 996 FunFam LOV domain-containing protein 449 613 - -
Lapu3g02134 996 Pfam PAS domain 204 300 IPR000014 -
Lapu3g02134 996 Pfam PAS domain 483 575 IPR000014 -
Lapu3g02134 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 204 296 IPR035965 -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 376 419 - -
Lapu3g02134 996 MobiDBLite consensus disorder prediction 89 109 - -
Lapu3g02134 996 PANTHER FLIPPASE KINASE 1-RELATED 175 963 - -
Lapu3g02134 996 CDD PAS 210 299 IPR000014 -
Lapu3g02134 996 CDD STKc_phototropin_like 659 970 - -
Lapu3g02134 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02134 Lapu-Chr3 41419584 41448230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02134 92 995 AGC Kinase Gene Family AT5G58140 73.546 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu3g02134 Pkinase 2.8e-61 CL0016