Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02133 ATGGCGACACTGCTGAGAAAACTGTGCGATTCCGCATCGCCGAAGCGATCGGGCTCCAACCCGAGCCCGAACCCGAACCGGAGCCCATCATCGGAACGCGCCCCCTCTCCTCTGGGCGCCTTTGACTCTCTCCCTGCCGACATACTGATGCAAATCGTGCGACTCTTGGGGCCCAAACACGCCGCCAGACTCAGCCTCCTCAGCAAGTCGTGGCGATCCCTTGTCTCCGACAACGACCTCTGGGTCCACTTCCTCCACACCCACCACCCTCACTCCGCCCTCTTTGCCGAAACCGCTCTCAGCTCCGGCTACCCTCTTCCGACATTGGCTGCTCAGAGCTCACCTCGCAGCTCGCTCCAGCATGTTTACGCCCTCCGTGAACGCCTGCCTCCGTCCGTTGTCATCGACGGGGGTTCTGGCTATTGTAAATTTGGTTGGAGCAAAGACGCTTCACCTTCTGGCCGATTGGCGACCTTTCTGGAATTTGGTAACGTTGAAACGCCCATGTATACTAGACTTCGACATTTTTTCGGGACTATCTATAACAGGATGCTGGTGAAACCAAGTTCTCAACCAGCTGTTGTTTCTATACCAATTTGCCACTATGATGATACTGAATCAGCCAAAGCATCAAGACAGCAGCTTAAAGAAGCAATCTATGCTGCCTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTCAATCAGGGGACTTTAGCTCTGTATGCTGCAAAACAAACTTCTGGGATTGCTGTTAATATAGGCTTTCAAGTGACATCTATTGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAAGTTGTGGGGCTGGGAGCACTAAAACTTACCGGATTTCTTAGAAAACAAATGCAGGAGAACAACATAAGTTTTGAATCTTTATACACTGTTCGCACGCTGAAAGAGAAGCTATGTTATGTTGCTGCTGACTATGAAACTGAGCTATTGAAAGATACACAAGCATCATTTGAAGCTGTGGAAGGGTTGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGGGAGATCTTATTCCAGCCACGACTTGCTGGGGTGCGAGCAATGGGTTTGCACCAAGCCATCGCACTTTGTATGGATCATTGCTATTCTGCAGAATTGGCAGGTAACAACGATTGGTACAAGACCGTTGTCTTATCAGGGGGAACTGCCTGTTTACCTGGTTTAGCAGAAAGGTTAGAAAAGGAACTTCATTCGTCACTTCCTCCTTATATATCCAATGGAATTAGAGTCATACCTCCTCCATTCGGTGCGGATACTGCCTGGTTTGGTGGAAAGATTATTGGCAGTTTGAGCACCTTTCCTGGCCCATGGTGTACCACAAAAAAGCAATTCCGTCAGAAGTCTAAACTAAACCGCATTTGGTGA 1410 0.4865 MATLLRKLCDSASPKRSGSNPSPNPNRSPSSERAPSPLGAFDSLPADILMQIVRLLGPKHAARLSLLSKSWRSLVSDNDLWVHFLHTHHPHSALFAETALSSGYPLPTLAAQSSPRSSLQHVYALRERLPPSVVIDGGSGYCKFGWSKDASPSGRLATFLEFGNVETPMYTRLRHFFGTIYNRMLVKPSSQPAVVSIPICHYDDTESAKASRQQLKEAIYAALFDMNVPAVCALNQGTLALYAAKQTSGIAVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLRKQMQENNISFESLYTVRTLKEKLCYVAADYETELLKDTQASFEAVEGLFTLSKERFQTGEILFQPRLAGVRAMGLHQAIALCMDHCYSAELAGNNDWYKTVVLSGGTACLPGLAERLEKELHSSLPPYISNGIRVIPPPFGADTAWFGGKIIGSLSTFPGPWCTTKKQFRQKSKLNRIW* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02133 469 MobiDBLite consensus disorder prediction 1 37 - -
Lapu3g02133 469 SUPERFAMILY Actin-like ATPase domain 131 252 IPR043129 -
Lapu3g02133 469 CDD F-box_AtARP8-like 40 84 - -
Lapu3g02133 469 SUPERFAMILY Actin-like ATPase domain 247 456 IPR043129 -
Lapu3g02133 469 CDD NBD_sugar-kinase_HSP70_actin 133 277 - -
Lapu3g02133 469 Gene3D - 237 434 - -
Lapu3g02133 469 Pfam Actin 205 455 IPR004000 -
Lapu3g02133 469 Gene3D - 39 84 - -
Lapu3g02133 469 Gene3D - 133 461 - -
Lapu3g02133 469 SMART actin_3 130 459 IPR004000 -
Lapu3g02133 469 MobiDBLite consensus disorder prediction 13 33 - -
Lapu3g02133 469 SMART fbox_2 44 84 IPR001810 GO:0005515
Lapu3g02133 469 Pfam F-box domain 41 82 IPR001810 GO:0005515
Lapu3g02133 469 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Lapu3g02133 469 SUPERFAMILY F-box domain 27 101 IPR036047 GO:0005515
Lapu3g02133 469 PANTHER ACTIN 173 461 IPR004000 -
Lapu3g02133 469 Gene3D Actin; Chain A, domain 4 280 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02133 Lapu-Chr3 41407148 41415008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02133 179 452 Cytoskeleton Gene Families AT3G12110 33.451 3.65e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02133 K16616 - gmx:100804254 835.484