Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02128 ATGGATGGGGTCGCACGTGCGGACAAGGCTCCGTCCACGGACTTCGCCTCGGAGTGGCGTCCCCGCGGCTCTGCGTTCGCTCCTTGTGTGCCTAAGGCTGAAGAAGAAGCTTCTGCTGCCGCTGCTGAGAAGCCGCAACCGTTGCGCGTGGTTGTCAGGAAACCTTTGGTGGCTAGATTGACCAAGGAAATAGTTCAAACATACAAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCATCAGTTGGAGTGCTTAACGATGGCTATGATAATGTAAACTCAGATCTTATTTTGACAGTGAATTTTGTCTTGAACCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCCGTGAAGATCATTAAAAACCAACCTGCATACTATCAACAAGCACTGGTTGAAGTAACTATCTTAGCAACGTTAAATAAGAAGTATGATCCCGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGACATTTGTGCATTTGCTTTGAATTGTTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCCCTTGGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGCGGACTGGCTCTGCTAAAAGAGGCTGGAATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCTTATATTCAGAGTCGATACTATCGATCACCCGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTCCTTGGATTACCATTATTCCCTGGGGCCTCAGAATTTGATCTTTTGAAACGGATGATTGAAATACTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACTCAAGTAAATTCTTTAAGTGTATTGGGAGTCTCCAGAACTTAGAGAGCATTGAGAGTTCCAAAAACGGAAGAAGTGTTTATCAAGCATTGACAGTGGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCATATGAATCTAGAGGCAATTGTTACAAACTATCCTTACAGAAAAAACCTACCTAAAGAAGATATTGTCAAAGAAAGTCAAATACGACTGGCTCTTATTGATTTTTTGAGAGGGCTTGTTGAATTGGATCCTTCAAAGCGCTGGTCACCTGTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCATTTACACATCCTTACAAGCCTCCCCCTGAGACTCCTCAAATGCCAGTAGTTCAAAATATGAAGGTGGATAATCATCCAGGAGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCGGGCAAAAGCAGAGCTTCACTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCAGCCAGCTAATAGTTATGGAAGTGTAGGAAGCCATGGGAGCTATAATGATAGTATTGGGCTAGGAAGCAGCTATGGAAGTTATGGAGAAAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTATGAACATGCACAATCAGGGTAGTATGTCAATGCTTGGGAATAGTCCTGATGCTAGGAGAAGAGTTAAATACCAACCTGGGAATGGGTTGGGCATAAGTCCATCAGCTGGAAATTTCGCTCCCCTGCCCCTTGGTGCCAGCCCATCACAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTTGGTTCTCCGGGACACTTTGGACCAACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAGTTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCACAAGCTCAAGAAACAACATTTTCTTCACATTGGCAAAGTCAATATCCTGACAGCACAAGCCATATTGAGGGTACATCTCAACCTCTTGGCAGTTCGCCATCATATCTACAGTCAAATAGCATTCCTGGAAACCGGAAGCAGCGAGGAAGTGGAGGATTATCTGCTAATCAGAACATTTCATGTTTGATTAAGCCTGGTGCTACTTTGAACTCACAATCAACAGAATTGGTTCGTGACAATACAGAGATAGGCATTTCATTGCCCGATCCTGGCGATTGGGACCCTAATTACAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCTGTTTGGCAAATGAGTTTGGCAAAAGTATGAATCTTGGATCTACTGAAACATGGGCTGGATTTGGAAGGTTCAAACATGTGTCCAGCTCGAATACTCCAATAATCAAGCAAAGACTAAATGGACCAAGTCAATCATTTGCGAATGTTGAGATGGGTAGCCTTCCGACGCATGATCTTCAAGCAGCCTATGTACCCTCTATGTCTAAACAGTTTCATCTCATGCCTCATATTTTACATAATTCTCCAAGCCGTTTTGGACACCAATCTGGTCAGAGATACACACATGGTAGACCCCCCCAGGGTGCTGATTGGAATCAAATTAAGATTCAGGCTCCTTCTGGTTTCAGCAGTGTGGGTCCTCGTTCTCCGAGGAATAACTCATTCACCAACAGTATGACGTGGGGGCGCAGAATGGATCCACCTGTCTCAAGCATGCCTCCGACATCCCGCACTAGAAAAGATTATGCAAGGATAGACTAG 2847 0.4243 MDGVARADKAPSTDFASEWRPRGSAFAPCVPKAEEEASAAAAEKPQPLRVVVRKPLVARLTKEIVQTYKICNPQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLNHLEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILATLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNSSKFFKCIGSLQNLESIESSKNGRSVYQALTVEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVELDPSKRWSPVQASKHPFVTGEPFTHPYKPPPETPQMPVVQNMKVDNHPGGGHWFAAGLSPNVPGKSRASLYSSPHFQMVQHQPANSYGSVGSHGSYNDSIGLGSSYGSYGESSNMFAYYSPIGPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVGSPGHFGPTSPARGTSHGSPLGKTAAVSQFNRRKNWGHSGSPQAQETTFSSHWQSQYPDSTSHIEGTSQPLGSSPSYLQSNSIPGNRKQRGSGGLSANQNISCLIKPGATLNSQSTELVRDNTEIGISLPDPGDWDPNYSDELLLQEDGSDESCLANEFGKSMNLGSTETWAGFGRFKHVSSSNTPIIKQRLNGPSQSFANVEMGSLPTHDLQAAYVPSMSKQFHLMPHILHNSPSRFGHQSGQRYTHGRPPQGADWNQIKIQAPSGFSSVGPRSPRNNSFTNSMTWGRRMDPPVSSMPPTSRTRKDYARID* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02128 948 CDD PKc_YAK1 123 466 - -
Lapu3g02128 948 MobiDBLite consensus disorder prediction 901 948 - -
Lapu3g02128 948 SMART serkin_6 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02128 948 PANTHER DUAL SPECIFICITY PROTEIN KINASE 17 469 - -
Lapu3g02128 948 Gene3D Transferase(Phosphotransferase) domain 1 204 467 - -
Lapu3g02128 948 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 86 202 - -
Lapu3g02128 948 MobiDBLite consensus disorder prediction 578 731 - -
Lapu3g02128 948 MobiDBLite consensus disorder prediction 648 731 - -
Lapu3g02128 948 SUPERFAMILY Protein kinase-like (PK-like) 118 489 IPR011009 -
Lapu3g02128 948 MobiDBLite consensus disorder prediction 1 24 - -
Lapu3g02128 948 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
Lapu3g02128 948 MobiDBLite consensus disorder prediction 623 640 - -
Lapu3g02128 948 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Lapu3g02128 948 Pfam Protein kinase domain 124 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02128 948 ProSiteProfiles Protein kinase domain profile. 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02128 948 MobiDBLite consensus disorder prediction 901 926 - -
Lapu3g02128 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02128 Lapu-Chr3 41270100 41311210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02128 122 352 MAP Kinase Gene Family AT3G18040 33.740 2.56e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lapu3g02128 Pkinase 4.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02128 K18670 - gmx:100792777 1755.34