Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02113 ATGAGGACACGCAAAGATAGTGAGAGGCGCAGATTCACTCCCGAATCGCAGAATTCAGCAGTAGGCTCTGAATCACCCCGGCGAAAACTGCGATTGTTTGCTCTGATGGCTGGACAATCGCGGAAATGGATGATCCTAGTTGTTACAATTTGGATTCAGGCTTTCACCGGCACCAATTTTGATTTTTCGCAATATTCATCATTGCTCAAATCCACGCTCAACATTTCGCAGGTGCAATTGAACTACCTTGCCACGGCCAACGATATGGGAAAGGTTTTTGGCTGGTCCTCTGGAATTGCCCTCATGCACCTTCCCCTATCTCTGGTCTTGTTCATCGCGGCTTCCATGGGATTCTTCGGCTATGGCCTCCAGTGGCTCCTTCTTACCGGAGTGGTTGATTTGCCTTATTTTCTGGTCTTTCTTCTGTGCCTCTTAGGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGTTAACCGAGCCCTTGCACTATCGCTCACTGTGAGTTTCAATGGCGTTAGTGCAGCTCTCTACACCCTTGCTGCCAATTCTATTGACCCTTCCTCCAGTGCAATCTATCTGCTTTTAAATGCTCTCGTTCCCCTTCTTATTTGCATTGCAGCACTGGTTCCTATACTTCGCCAACCGACTTTAGACCCTCTTCCTCCTGATGCAGTAAACCGGGACTCAGTTATATTTCTAATATTGAACTTCTTAGCCCTTTTAACTGGCCTTTATCTTCTCCTGTTTGGCTCTTCTACTTCTGGTGTGACTTCTGCTCGGCTCTGTTTTGGTGGAGCTATTCTCCTCCTCATCTTCCCATTATGTATTCCTGGCATTGTATATGCTCGGGCTTGGTTTAGGCAAACCATCCATTCCAGCTTTCGGATGGAAAGCTCTAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAACTCCATAGCCGTCACAGTAGTATTGTTAGCAATGGAGATACTTACAACCTGCTAAGTGACAATGGATACATGTATGACAGCCAGAAGGCAAAAGAGAGTGATGTAGGTTGCGAGAGGGTAATTGGTCAGGATCAGCTATCAGTGCTAGGAGAAGAGCACCCAGTTGCAGTAATTGTTCGCAGATTGGATTTTTGGCTATACTTTATTACATACTTCTGTGGAGGCACGCTTGGTCTAGTCTATAGCAATAATCTTGGACAGATTGCCCAATCTCTGGGCCAGAGCTCAAATACTTCTACAGTTGTCACGCTTTATGCATCTTTTTCCTTTTTTGGTCGCTTGCTTTCAGCTGGACCAGACTATATTAGGAATAAGTTCTACTTTGCAAGGACTGGTTGGCTTTCAATTGCACTTATACCAACCCCAGTTGCGTTCTTCCTCCTTGCTGCCTCAGACAGTCTTCTGGCACTGCAGACAGGCACAGCGCTGATTGGATTGAGCTCTGGTTTTATATTCGCAGCTGCTGTGTCAGTTACATCTGAGCTGTTTGGACCTAACAGTGTGGGTGTCAATCACAACATCCTCATAACAAATATACCTATTGGCTCTCTTCTCTATGGCTTTCTTGCTGCACTAGTTTATGATGCTAATGCACACTCAATTCCAGGAGACTTGACAATGTCTGACTCAATAGTGTGCATGGGAAGGGAGTGTTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTTGGACTAGCATCAAGCATCCTATTATTCTTAAGAACCAAACATGCATATGATCATTTTGAGAAACACCGTAAAGCAACACAATCAATTATTTCTTAA 1824 0.4468 MRTRKDSERRRFTPESQNSAVGSESPRRKLRLFALMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSLLKSTLNISQVQLNYLATANDMGKVFGWSSGIALMHLPLSLVLFIAASMGFFGYGLQWLLLTGVVDLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGVSAALYTLAANSIDPSSSAIYLLLNALVPLLICIAALVPILRQPTLDPLPPDAVNRDSVIFLILNFLALLTGLYLLLFGSSTSGVTSARLCFGGAILLLIFPLCIPGIVYARAWFRQTIHSSFRMESSSFILVHDDDLEMHKELHSRHSSIVSNGDTYNLLSDNGYMYDSQKAKESDVGCERVIGQDQLSVLGEEHPVAVIVRRLDFWLYFITYFCGGTLGLVYSNNLGQIAQSLGQSSNTSTVVTLYASFSFFGRLLSAGPDYIRNKFYFARTGWLSIALIPTPVAFFLLAASDSLLALQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAHSIPGDLTMSDSIVCMGRECYFWTFVWWGCISVLGLASSILLFLRTKHAYDHFEKHRKATQSIIS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02113 607 SUPERFAMILY MFS general substrate transporter 14 223 IPR036259 -
Lapu3g02113 607 SUPERFAMILY MFS general substrate transporter 276 590 IPR036259 -
Lapu3g02113 607 Pfam Nodulin-like 42 287 IPR010658 -
Lapu3g02113 607 Gene3D MFS general substrate transporter like domains 383 597 IPR036259 -
Lapu3g02113 607 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g02113 607 Gene3D MFS general substrate transporter like domains 2 221 IPR036259 -
Lapu3g02113 607 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 43 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02113 Lapu-Chr3 41033989 41039311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02113 1 604 Nodulin-like Gene Family AT1G31470 57.307 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02113 - - gmx:100803546 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02113 3 41033989 41039311 Lapu3g02113 3 41033989 41039311 ECH
Lapu3g02113 3 41033989 41039311 Lapu3g02113 3 41033989 41039311 PCT