Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02111 ATGCATAAGCTTATTGTTTTCTTTTTGTTTGATTGGTACAGAATGGCGACCAGTAGAACGAGTCAATGGTTAAGTGTGCTAATATGCGTGGTACTATTACTAAAGGCAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTGCACCAGCTTACCACTTCCATAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTTCTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACGGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCGGTTGTTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCTGGTTGTTCTGCTGGAGGATTGGCTGTAATTTTAAACTGTGATCGATTCAAAACACTGCTACCTAGAACAACTAAAGTGAAATGCCTTGCAGATGCTGGCTATTTTATCAATGTAAAGGATGTCTCTGGGGCGCAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAGACACATGGTTCAGCTAAGAATTTGCCCGCATCATGCACTTCAAGACTCAGACCAGGGCTCTGCTTTTTCCCACAAAATGTGGTATCACAAATCAGTACGCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATAAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCATGGCCAATGGCGTGAATGCAAGCTTGATATAAAAAACTGCTCACCGAATCAACTCAGTGTAATGCAAGTATTCAGGAATGATTTCCTAAGGGCATTTGGTGCGGTTGGGAACTCTCCATCTAAAGGGCATTTTATAGATGGTTGCTATGCTCACTGCCAAACTGGAACACAAGAGACATGGATGAGAAATGACTCTCCTGTGTTAGGCAGCACAACAATTGCAAAGGCAGTGGGAGACTGGTTTTATGATCGAAGGCCATTCCATCAGATTGATTGTGCCTACCCTTGCAACCCCACTTGCCACAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG 1242 0.4259 MHKLIVFFLFDWYRMATSRTSQWLSVLICVVLLLKAEGVPVGITFVENAVAKGAVCLDGSAPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNGKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFAAVVEDLLAKGMKNAQNAIISGCSAGGLAVILNCDRFKTLLPRTTKVKCLADAGYFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPASCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGQWRECKLDIKNCSPNQLSVMQVFRNDFLRAFGAVGNSPSKGHFIDGCYAHCQTGTQETWMRNDSPVLGSTTIAKAVGDWFYDRRPFHQIDCAYPCNPTCHNRIFDQNERPDV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02111 413 PANTHER NOTUM-RELATED 25 402 IPR004963 GO:0016787
Lapu3g02111 413 Pfam Pectinacetylesterase 35 385 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02111 Lapu-Chr3 41000773 41006272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02111 19 413 Carbohydrate Esterase AT4G19420 60.000 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02111 K19882 - gmx:100781246 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02111 3 41000773 41006272 Lapu3g02111 3 41000773 41006272 ECH
Lapu3g02111 3 41000773 41006272 Lapu3g02110 3 40948569 40953046 PCT
Lapu3g02111 3 41000773 41006272 Lapu3g02111 3 41000773 41006272 PCT