Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02110 ATGGAGAGTGCAAGAATCATCCAATGGTTAAATCTTCTAGCCTGTGTACTGGTATTGCTCAAGGCAGAAGGATCTTTGGTTCCATTGACTTTGGTCGAGAATGCACTGTCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGTTGGAGAAGGGATTAACAACTGGATTGTTCACATGGAGGGAGGAGGATGGTGCAAAGATGCTGACGATTGCCTTGGGCGTAAGGACACTCGCTTAGGTTCATCTAAGCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGCAACGACCGACAGTATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGTTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATTTGTACTTTAGAGGAGCAAGGATTTTTTCTGCTGTAATGGAAGATTTATTAGCAAAAGGAATGAAAAGGGCTGAAAATGCTATTCTCTCTGGCTGTTCAGCTGGAGGATTGACTGCTATATTACACTGTGACAATTTTAGAAATCTGTTGCCTTCTGAAGCTAATGTAAAATGTGTTCCAGATGCTGGTTATTTTATCGATGTAGAAGATATCTCAGGAGCACGTTTCATTGAAGATTTTTACAGTAAAGTTGTGTCGACACATGGCTCCGCAAAGAATTTGCCCACATCTTGCACTTCCAAACTCAGCCCTGCACTGTGCTTTTTCCCACAATATGCGGCATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCGTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGTGCTGCTGATCCCAGTGACAATTGGCATAACTGCAAGCTTGATTTAAGCAAATGCTCACCTGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTATGGTTGGAGACTCTTCCTCGAACGGAATGTTTATTGACTCTTGCTATGACCACTGTCAAACAGAATCACAGGAGACATGGTTTCAAAGTGACTCACCACATCTTGCCAATACAACAATTGCCAAGGCAGTAGGGGACTGGTTTTATGGTCGAAACCCTTTCCATCATGTAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCGTGTTTCTGATCTGAAAGACCACCCTGGAATATAG 1200 0.425 MESARIIQWLNLLACVLVLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGVGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSKQMVEDLYFSGILGNDRQYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMEDLLAKGMKRAENAILSGCSAGGLTAILHCDNFRNLLPSEANVKCVPDAGYFIDVEDISGARFIEDFYSKVVSTHGSAKNLPTSCTSKLSPALCFFPQYAASHISTPIFIVNSAYDSWQIRNILAPGAADPSDNWHNCKLDLSKCSPDQLSIVQGFKKEFEKAVSMVGDSSSNGMFIDSCYDHCQTESQETWFQSDSPHLANTTIAKAVGDWFYGRNPFHHVDCNYPCNPTCQNRVSDLKDHPGI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02110 399 PANTHER NOTUM-RELATED 11 388 IPR004963 GO:0016787
Lapu3g02110 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02110 Lapu-Chr3 40948569 40953046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02110 5 399 Carbohydrate Esterase AT4G19420 56.744 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02110 K19882 - gmx:100780707 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02110 3 40948569 40953046 Lapu3g02110 3 40948569 40953046 ECH
Lapu3g02111 3 41000773 41006272 Lapu3g02110 3 40948569 40953046 PCT