Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02096 ATGGCAGCAGTGTCAGGGGGTGAGATATGGAAGGCCCACACGGCCATGGCAATGGTGCAGTTATTCAATGGAGGCTATCACGTCATCACCAAAGTAGCCCTTAACTTTGGCGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCCATTCTCGCTCCCCTCGCTTTTATCCGTGAGAAGCGTACACGGCCACCGTTGACTAAACACCTTCTCGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCATCTTTTGTTTCTTGTTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTGCTAAAATATGAAGGTATGGCCAAGGTTGGAGGAACTTTCTCCTGTGTTTTAGGCGCTGTGCTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACGGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGCGGTTTACTGGATCTTGGATTGGATCAATTTCATCTTGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTATTAAAAAAGTATCCTGCAAACCTATCTGTCACGGCATATTCATACTTCTTTGGAGCTGTACTGATGGTAACTACATCGTTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACAAAGTCTGAAACGATTGCTGTTATTTATGCTGGATTTATTGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGACCAGCCATGGTTGCTCTTTATAATCCACTTCAACCAGGAGCTTCTGCACTCCTATCCAGAATTTTTCTTGGCAGTCCAATTTACATGGGAAGCATCGTAGGTGGATCTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTATAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGGCTCTTGGGTCTCTGAATCTCTTGTCCATGACAAGAGTACTTATAATAGAGTTAACATTTTTTCAGGCCCCACCAGCATGTCCCCAAAGCCTTCAGATTAA 1161 0.441 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNFGVNQIVFCVFRDIIALAILAPLAFIREKRTRPPLTKHLLVSFFFLGLTGIFGNHLLFLVGLSYTNPTYAAAVQPATPVFTFLLAVMMGTERVNLLKYEGMAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVSHSEISAKGQPEPSGWLIGGLLDLGLDQFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTKSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIVGGSLIIIGLYAVTWASYRERHAAAAVISHGSWVSESLVHDKSTYNRVNIFSGPTSMSPKPSD* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02096 386 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
Lapu3g02096 386 Pfam EamA-like transporter family 17 136 IPR000620 GO:0016020
Lapu3g02096 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
Lapu3g02096 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 343 - -
Lapu3g02096 386 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02096 Lapu-Chr3 40603728 40617153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02096 1 271 Nodulin-like Gene Family AT3G45870 68.635 4.38e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02096 - - gmx:100809051 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02096 3 40603728 40617153 Lapu3g02096 3 40603728 40617153 ECH
Lapu2g00984 2 9170251 9189937 Lapu3g02096 3 40603728 40617153 PCT