Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02093 ATGATCACTGATGTGCCCCCGTCTATGGTTCAAAATGGTAGGTCAAGCAGATATTCCTTTGGCTCTAGCAATGGCAATGATGATACCCCTGCTCACAACGGTGCTGCTGTCATCAATGTTGATGACTACGATAGTGATAGCTCCAATTTTGCCCCACCCACGCCATCAACCATGTCAATGCCTGTTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATCAACAGATTCCAGGTGGATGGATTTTTAAAACTGATGCAGAAGCAAATTCAATCTGCTGGGAAACGTGGATTCTTTTCTAAAAGATCAGTAGGTCCTCAAGTTCGAGAAAAAATTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCTACATCATTGCTCAAGTTAAATGTTGATTTAGTTAGCCGAGCAACAAAATTTTTCCAAATAATTTTGAAATATATGGGAATTGATCCATCTGATCGTGTCACTCCTATAAGCTTAGATGAACGGGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAACGACCAGAACTACGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCCTCAATGTCTCCTAGTAAAGACATTAGCAGTTACCTATCAGAATACATTCATAACATAGCAAATGGTGTGGCTACTGATTCTGAGATCCAAGTCCTTGCATTAAATTCATTAAATGCTTTGAAGCATTCAGTAAAGGCTGGTCCCAGACATATAATTCCTGGGCGTGAGGAGATTGAAGCTTTGTTGACCGGGAGAAAGCTTACAACTATAGTGTTCTTTCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACCACAGTTTCTGATGCTGTTCAGGAACTTGCAGGGCTCATTAAACTGTCGGCCTACTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCGAAAGCACCTGATCTGGGGAATGAGGAGTACATTGGGTTGGATGAAAACAAATATATTGGGGATCTGCTGGCAGAATTCAAAGTTGCAAAGGATCGGAGTAAAGGAGAAATCTTGCACTGTAAATTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGAAGCAATGTTTGTGCAATTGTCTTACGTACAATTGCAACATGATTATATTTTGGGCAATTACCCTATTGGAAGGGATGATGCTGCTCAGCTTTCTGCTCTACAAATCTTGGCTGAGATTGGTTTTCTTAGCACACCAGAATCATGCACTGATGGAGATACTTTATTTCTTAGTGACTGCAATTCACTTCTGGAGCGTTTCCTGCCAAGACAAATTTCAATGACAAGAGCAAAACGGGAATGGGAGTATGACATTATTTCTCGTTATCGTTCATTGGGGAATCTGACAAAAGATGATGCGCGACAACAATTCCTGCGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGACCCTATTGGACTCTTACCCGGTCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGCCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATTATGCAATTTGGAAGCAGTAATACTGCAGTTTTTTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAGGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGCTGCGGCGCTATTCGAAAGCACGATCTGCTGCTGCTGGTGGTTCTTTGAATGGAGATATTTCTAATAATTCTTCTAAACCTCCTAATATGGAATTATATGAGAAGCGTGTTCAAGACTTGTCAAAACTAATTGAAGAATCTCAAAAAAATGCTGATCAATTACTTGAAGAATTACGTGTGAAGCAAAGACAAGAAGAGAAAATGCAAGAAGAATTGAATGGCTTGAAAGAATCCTTAAAAGCTGATAAGCAAAATCTAGATTCTGTTACAAGTGACCGTGATAGACTTAGATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCTAGGATGGCCAAGTTAAGTAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAAGTGACTCAGAAGCTTGAAGATGAGCTAAAAGTTTGTAAATATGAGCTGTTTGCAGCCAATGAAACTATCAAAAGCTTGAAAAGTGAAAAAATGATTTTGGAGCAGAATATATCTGCACTTGAGAAGAGGAATGCTGGAGAGATTAGTTCCCTTCAATGGAAACTTGAGCAAGAACGCAAAGCTGTGAAGTCTGAAGTGTACGAGCTTGAAAGAAAGCTAGAAGGGTGTAGGCAAGAATTATTGGCTGCTAAGGCTACTATTTCAGTCAAGGACTCTGAGTTGGCTTCAATGCAAAATAATTTGAAGGAACTAGAAGAATTGAGAGAAATGAAAGAGGATATTGATAGAAAGAATGAACAGACAGCTGCCATACTGAAAATGCAAGGGGCTCAACTAGCTGAAATGGAAACACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATTGAAGACATGAAAGGCAAGATTAGAGTTTACTGCCGACTAAGGCCTCTCAATGAAAAAGAGATAACTGAGAAAGAAAGAAACGTTGTCACTGCAGTAGATGAGTTTACAGTTGAATATCCATGGAAAGATGATAAACCAAAGCAGTACATATATGACCGTGTTTTTGATGCTGTTGCAACTCAAGAAAGTGTATTTGAGGATACAAAGTACTTGGTGCAGTCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCAGACAACAACCCTGGCCTTACCCCACGCGCAATTGCAGAACTTTTTAGAATTTTAAGAAGAGATAGTAACAAGTACTCTTTTTCCTTGAAGGCATACATGGTGGAATTGTATCAAGATACCCTCATAGATCTTTTGGCACCAAAGAATGGAAAACATTTAAAATTGGATATCAAGAAGGATTCGATGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCAATTTCTACAATTGAAGAATTGAATACTATAATACAAAGAGGATCTGAGCGGCGACATATATCAGGAACCCAAATGAATGATGAAAGTTCAAGATCTCATCTCATTCTATCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAATCAGGTTCTACCGGGAGTCAGCTTAAGGAAGCTCAAAGCATTAACAAGTCATTATCAGCACTTGCAGATGTTATCAGTGCTTTGTCTTCTGGTAGTCAACACACACCTTACAGGAATCACAAGTTAACCATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTAATGTTTGTGAATGTTTCACCGGCAGAATCAAATTTGGATGAGACACATAACTCTCTCATGTACGCATCCCGAGTAAGATCCATTGTGAATGACCCCAGCAAGAATGTTTCTTCAAAGGAGATAGCAAGGCTGAAGAAGTTGGTTGCATATTGGAAGCAGCAAGCTGGTAAAGGACCTGAGTATGAAGACTTAGAAGAAATTCAAGATGAAAGACCAACTAAAGAGAATGGTAATGGCAATAGGTAA 3837 0.3873 MITDVPPSMVQNGRSSRYSFGSSNGNDDTPAHNGAAVINVDDYDSDSSNFAPPTPSTMSMPVPAELAGAVPLINRFQVDGFLKLMQKQIQSAGKRGFFSKRSVGPQVREKITFEDMLSFQKDPIPTSLLKLNVDLVSRATKFFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIANGVATDSEIQVLALNSLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVSDAVQELAGLIKLSAYSSFSLFECRKVVTGSKAPDLGNEEYIGLDENKYIGDLLAEFKVAKDRSKGEILHCKLIFKKKLFRESDEAVTEAMFVQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFLSTPESCTDGDTLFLSDCNSLLERFLPRQISMTRAKREWEYDIISRYRSLGNLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAAGGSLNGDISNNSSKPPNMELYEKRVQDLSKLIEESQKNADQLLEELRVKQRQEEKMQEELNGLKESLKADKQNLDSVTSDRDRLRSLCNEKDKELQAAILDKRNMESRMAKLSNAVIENTAKKDLANAGNRQVTQKLEDELKVCKYELFAANETIKSLKSEKMILEQNISALEKRNAGEISSLQWKLEQERKAVKSEVYELERKLEGCRQELLAAKATISVKDSELASMQNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLNEKEITEKERNVVTAVDEFTVEYPWKDDKPKQYIYDRVFDAVATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDNNPGLTPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLAPKNGKHLKLDIKKDSMGMVVVENVTVMSISTIEELNTIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALADVISALSSGSQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKQQAGKGPEYEDLEEIQDERPTKENGNGNR* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02093 1278 PANTHER MYOSIN VII, XV 10 910 - -
Lapu3g02093 1278 MobiDBLite consensus disorder prediction 1255 1278 - -
Lapu3g02093 1278 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Lapu3g02093 1278 Coils Coil 804 824 - -
Lapu3g02093 1278 MobiDBLite consensus disorder prediction 1 34 - -
Lapu3g02093 1278 Coils Coil 832 869 - -
Lapu3g02093 1278 Coils Coil 708 728 - -
Lapu3g02093 1278 ProSitePatterns Kinesin motor domain signature. 1125 1136 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu3g02093 1278 ProSiteProfiles FERM domain profile. 283 605 IPR000299 GO:0005856
Lapu3g02093 1278 FunFam Kinesin-like calmodulin binding protein 386 505 - -
Lapu3g02093 1278 Gene3D - 282 386 - -
Lapu3g02093 1278 FunFam Kinesin-like calmodulin-binding protein 848 1227 - -
Lapu3g02093 1278 CDD FERM_B-lobe 398 504 IPR019748 -
Lapu3g02093 1278 Gene3D MyTH4 domain 98 280 IPR038185 -
Lapu3g02093 1278 ProSiteProfiles Kinesin motor domain profile. 904 1225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 SUPERFAMILY Prismane protein-like 847 908 IPR011254 GO:0003824|GO:0016491
Lapu3g02093 1278 SUPERFAMILY Second domain of FERM 381 506 IPR035963 -
Lapu3g02093 1278 Gene3D - 1228 1275 - -
Lapu3g02093 1278 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Lapu3g02093 1278 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 509 618 - -
Lapu3g02093 1278 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Lapu3g02093 1278 Gene3D Kinesin motor domain 891 1227 IPR036961 -
Lapu3g02093 1278 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Lapu3g02093 1278 SMART B41_5 279 511 IPR019749 -
Lapu3g02093 1278 MobiDBLite consensus disorder prediction 1252 1278 - -
Lapu3g02093 1278 Pfam Kinesin motor domain 910 1225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 CDD KISc_C_terminal 902 1227 - -
Lapu3g02093 1278 CDD FERM_C_KCBP 508 616 - -
Lapu3g02093 1278 SUPERFAMILY PH domain-like 511 599 - -
Lapu3g02093 1278 SMART kinesin_4 902 1233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 Coils Coil 631 686 - -
Lapu3g02093 1278 Pfam FERM central domain 390 511 IPR019748 -
Lapu3g02093 1278 Gene3D - 509 617 IPR011993 -
Lapu3g02093 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 1252 IPR027417 -
Lapu3g02093 1278 PRINTS Kinesin heavy chain signature 1126 1144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 PRINTS Kinesin heavy chain signature 1095 1112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 PRINTS Kinesin heavy chain signature 1175 1196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 PRINTS Kinesin heavy chain signature 976 997 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02093 1278 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Lapu3g02093 1278 Coils Coil 761 788 - -
Lapu3g02093 1278 Gene3D - 396 504 IPR014352 -
Lapu3g02093 1278 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02093 Lapu-Chr3 40539774 40550054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02093 51 1275 Calmodulin-binding Proteins AT5G65930 73.491 0.0 1819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02093 - - gmx:100807481 2305.02