Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02092 ATGTCTTCCTCTGGTTATGCCACAAGCAGTGCTTTGTTTTTTCTGTTTCTGGCTGTGCTTGTTGCAAAAGTTAGCTTTTGCTTTTCCACCAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTGGGGAACACCCAGATGATGTTCTTAGGGAAAATCATCAAATGCTTGCTGCTGTTCACAGTGGAAGCACTGAACAAGCCCAAGCCTCTCATGTTTATACCTACAGACATGCTTTCAGAGGATTTGCAGCCAAACTCAGTGATGAACAGGCTTCCCAAATTTCAAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAATCTTCACACAACTCATTCATGGGATTTCATGGGACTTCTGGATGACCAAACCATGGAGACTCTCGGTTATTCCATCAGAAACCAAGAAAATATCATCATTGGTTTCATTGATACTGTTATATTCACATTCACTATTCACTCAGGAATTTGGCCTGAATCCCCTAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCAGGCTGGAAGGGCCAATGCCAATCAGGGGAAGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATAGGAGCCAGGTACTACAGGATTGGATATGAAGCTGAGGAAGAGTCAGATGCAAAAATCTCCTTCAGATCTGCAAGGGATAGCACTGGTCATGGGAGCCATACAGCCTCCATAGCTGCGGGGAGGTATGTGGCAAACATGAACTACAAGGGACTGGCTGCTGGAGGAGCAAGGGGAGGCGCACCAATGGCCAGAATTGCTGTGTACAAGACTTGTTGGGATTCTGGTTGTTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTTTCTCTGGGTGCTGAATCACCTCAAGGAGACTATTTCAGTGATGCCATTTCTGTGGGGTCATTCCATGCGGCTAGTCGTGGGGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGGAGTGCTGCTTCTGCCACAAACATTGCTCCATGGATTCTCACTGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCGGATATCATATTGGGAAATGGTGCCAAAATCATGGGTGAAAGTCTCAGCCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCTGCAGCCAATGGAGGATACTTTACTTCTTATCAATCCAGTTACTGTTTGGAAAGTTCTTTGAATAAAACAAAGAGCAAAGGCAAGGTTCTGGTGTGTAGACAAGCAGAGAGTTCAACAGAGTCAAAGGTGCAGAAGAGCAAGATAGTGAAAGATGCTGGTGGAGTTGGCATGATACTTATTGATGAGACAGATGAAGATGTCGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAGACAGGGGCACGGATTCTGTCCTATCTCAAAACTACACGTAAGCCAGTGTCAAGGATATTTGGTACAAAGACAGTTCTAGGAGCTCGTCCTGCCCCACGCGTAGCAGCTTTTTCTTCTAAAGGTCCCAATGCCTTAAACCCTGAAATTCTGAAGCCTGATGTCACAGCTCCAGGACTAAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACATCTATGGCATGTCCGCATGTAACAGGAATCGCAACCTTAGTCAAAGCTGTCCATCCTTCGTGGTCCCCTTCTGCTATCAAATCTGCCATAATGACCACTGCTACAATACTGGATAAACACCACAGACCCATCATTGCAGATCCAGAGCAAAGAAGGGCTAACGCATTTGATTACGGATCAGGGTTTGTGAACCCTGCTAGAGTACTTGATCCTGGTCTCATCTACGACTCACAGCCTGCAGATTATGTTGCATTCCTGTGTTCAATTGGTTATGATCAGAGGTCACTCCATCAAGTTACAAGAGACAACAGCTCTTGTCATAGGACATTCAGCACAGTATCTGACCTCAACTACCCATCTATTGCAGTGCCCAATCTTAAAGACAATTTTTCAGTTACTAGGATTGTGACTAATGTTGGGAAAGCAACAAGTGTTTATAAAGCTGTAGTGTCTTCTCCACCTGGTGTTAGAGTCAGTGTTATACCTAACCGGTTAACTTTTACGAGAATTGGGCAGAAAATTAATTTCACTGTGAAATTCAAAGTAACTGCTCCCTCAAAGGGATATTCATTTGGGTTCTTGTCATGGACGAATAGAAGGTCACAAGTCACTAGTCCTTTGGTTGTCCAGGTTGCACCTGGAATAAAATAG 2301 0.4455 MSSSGYATSSALFFLFLAVLVAKVSFCFSTKVYVVYMGSKSGEHPDDVLRENHQMLAAVHSGSTEQAQASHVYTYRHAFRGFAAKLSDEQASQISKMPGVVSVFPNSKRNLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTVIFTFTIHSGIWPESPSFSDTDMPAVPPGWKGQCQSGEAFNASSCNRKVIGARYYRIGYEAEEESDAKISFRSARDSTGHGSHTASIAAGRYVANMNYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAASRGVLVVASAGNEGSAASATNIAPWILTVAASSTDRDFTSDIILGNGAKIMGESLSLFEMNASTRIISASAANGGYFTSYQSSYCLESSLNKTKSKGKVLVCRQAESSTESKVQKSKIVKDAGGVGMILIDETDEDVAIPFVIPSAIVGKKTGARILSYLKTTRKPVSRIFGTKTVLGARPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPIIADPEQRRANAFDYGSGFVNPARVLDPGLIYDSQPADYVAFLCSIGYDQRSLHQVTRDNSSCHRTFSTVSDLNYPSIAVPNLKDNFSVTRIVTNVGKATSVYKAVVSSPPGVRVSVIPNRLTFTRIGQKINFTVKFKVTAPSKGYSFGFLSWTNRRSQVTSPLVVQVAPGIK* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02092 766 ProSiteProfiles Serine proteases, subtilase domain profile. 116 619 - -
Lapu3g02092 766 Gene3D - 355 497 - -
Lapu3g02092 766 FunFam subtilisin-like protease SBT1.5 355 497 - -
Lapu3g02092 766 FunFam Subtilisin-like protease SBT1.5 636 762 - -
Lapu3g02092 766 FunFam Subtilisin-like protease SBT1.5 140 364 - -
Lapu3g02092 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Lapu3g02092 766 SUPERFAMILY Subtilisin-like 111 623 IPR036852 GO:0004252|GO:0006508
Lapu3g02092 766 CDD PA_subtilisin_like 361 490 - -
Lapu3g02092 766 CDD Peptidases_S8_3 111 585 IPR034197 -
Lapu3g02092 766 Pfam Fibronectin type-III domain 665 759 IPR041469 -
Lapu3g02092 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Lapu3g02092 766 Gene3D - 636 762 - -
Lapu3g02092 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 759 IPR045051 -
Lapu3g02092 766 Pfam Subtilase family 211 587 IPR000209 GO:0006508|GO:0008236
Lapu3g02092 766 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Lapu3g02092 766 Pfam PA domain 405 476 IPR003137 -
Lapu3g02092 766 Gene3D Peptidase S8/S53 domain 141 632 IPR036852 GO:0004252|GO:0006508
Lapu3g02092 766 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Lapu3g02092 766 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Lapu3g02092 766 FunFam Subtilisin-like protease SBT5.3 22 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02092 Lapu-Chr3 40520237 40525974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02092 30 760 Subtilisin-like Serine Gene Family AT1G32960 41.699 0.0 557