Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02089 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGGACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATAAAGAAAATGAAGAAGAAATATTACTCGTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTGCGAAAAATGAATCATCCAAATATTGTTAAGCTGAAGGAAGTTATTCGAGAATGCGACACCCTGTGCCTTGTTTTTGAGTACATGGAATACAACCTGTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGATATTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTACATGCATCAGCGTGGATACTTTCATCGTGATCTGAAGCCAGAGAACTTGCTCGTCACTAAAAATGTCATCAAGATTGCTGATTTTGGCCTAGTCCGAGAGACCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAGTCCCATTTATATGGATCTAAAGTTGATATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTACGTCCTCTATTCCCTGGTACCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTAATAGGTAGTCCAACAACTGAATCTTGGGAAGATGGACTAAAGCTTGCCAGGGATATCAACTATCAGTTTCCACAGCTTGCTAGTGTACATCTCTCTAATCTGATCCCATCCAGAAGTGATGATGCAATTAGCCTTGTTACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCATCGGAGGCTCTTCAGCATCCTTTCTTTCAGAGTTGCTTTTACATCCCTCCATCGCTTCGCACAAGAGCTGTGACCAGAACTCCTCCATCTGCTGGGACCAGGGGTTCACTGGACAAGCAGGGCCTCAAGAGATACTCTAGTGCTATGCCTAATACAAAAAACGCAAACAATTTTTCTTCCCCAAAATTACATGCTTCTATGGCTTCAGGTGTGCAACGGAAGCTGGATTTGGCAACCGAGGATGGAATAAAGAACAAGAAGTCACTGAAAACTGCTCAACAATCAAAGTATCGATTACCAGGAAAAGACAACCCGAGTTCTATAAACAAGGGGAGGACCGGACGCGGGGTTTCCGAAAGCGCTGAGAAGTTGGCCAACATGTCGATCGGTACGCGAAGACAGTCCATGGGACAAAGCCGTCCACCGCCTCCAATGAAGGCTGGAGTGAATTGGATTTCTGAATCTGGAAACTTGGTACTCAGGTCCGGACAACAAATTCCAACTGAGAGAAGTTTGACAAGAAAAGTTGCCGGCTGA 1359 0.4386 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRECDTLCLVFEYMEYNLYQLMKNREKLFSENDIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKNVIKIADFGLVRETSSQPPYTEYVSTRWYRAPEVLLQSHLYGSKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTTESWEDGLKLARDINYQFPQLASVHLSNLIPSRSDDAISLVTSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGSLDKQGLKRYSSAMPNTKNANNFSSPKLHASMASGVQRKLDLATEDGIKNKKSLKTAQQSKYRLPGKDNPSSINKGRTGRGVSESAEKLANMSIGTRRQSMGQSRPPPPMKAGVNWISESGNLVLRSGQQIPTERSLTRKVAG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02089 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02089 452 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Lapu3g02089 452 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Lapu3g02089 452 MobiDBLite consensus disorder prediction 398 412 - -
Lapu3g02089 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02089 452 MobiDBLite consensus disorder prediction 356 424 - -
Lapu3g02089 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02089 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lapu3g02089 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 334 - -
Lapu3g02089 452 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Lapu3g02089 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lapu3g02089 452 MobiDBLite consensus disorder prediction 362 388 - -
Lapu3g02089 452 CDD STKc_MAK_like 4 283 - -
Lapu3g02089 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lapu3g02089 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02089 Lapu-Chr3 40431742 40439155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02089 1 290 Core Cell Cycle Gene Families AT3G48750 36.700 5.36e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lapu3g02089 Pkinase 7.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02089 K08829 - gmx:100784474 852.047