Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02085 ATGTTTGAAGTCGTCTATCTAAAAGTCAAGTCTCTACAAAAGTTAGACAAATGTACAGAAGCTATTAATGAGTGCAAGCATGTTCTTGATGTTTTTGAGAAGACATTTGTTCAGGGTACACTTGATACACAAGTCGACAATAAATTGCAAGAGATAGTCAGTCGTGTACTGGAATTGCTTCCAGAGCTTTGGAAACAGGATGGTTGTTATAATGAGGCATTGGCTGCTTATAGGAATGCCCTACTTAGTCAATGGAATCTTGATAATGAATTTTGTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGTGAAGTTGAGGCAAGTCCACCTAACAAGACTGATGGGTCTTATGTACCCAAAAGCAATCTGGAAGAGGCAATTCTTCTTTTAATGATTATTTTGAGAAACTTCGTCCTGGGTAAGATAAAGTGGGATCCTTCAGTTAAGGAACACCTCACTTTCACACTTTCAACATGTGGACAAACTTTTATTTTAGCAAAGCAATTTGAAGAGCTGATACCTGGTATATATCACCGTATTGATCGTTGGAATTTTTTAGCTTTGTGTAATAGTGGAGCTGGAGAAGATAAAAGTGCTTTAAATCTGCTTAGGATGTCTTTACATAAACATGAACGACCAGGTGACCTAATATCATTATTATTGGCTGCCAAAATTTGTAGTGAGAATCCTCATCTTGCCGCTGAGGGAGTGGGTTATGCACAAAGAGCAATCAATAATGCCCAAGGATTAGATGAGCATTTGAAAGGTGTGGGTCTTAGGATGTTGGGACTTTGCCTAGGAAAACAAGCCAATGTTTGTTCTTCCGACAAAGATAGGGGTGAGCTTCAATCTGAAGCTCTAAATTCATTGGAGAAGGCAATTAGATTAGAGCAAAACAATTTTGATCTAATTTTTGAATTGGCTATTCAACATGCTATGCACCAAAATTTACCTACTGCTTTATTCTGTGCCAAACAGTTCTTTGATAAAACTGGTGGCTCTAAACTGAATGGTTGGAGATTGCTTGCTCTAATTTTGTCAGCACAAAAAAGATTTCCTGAGGCCGAACTTGTCACTGATGCAACTTTAGACGAGACTGCGAAATGGGAGCAGGGGCCGCTACTCAGTTTGAAAGCCAAGTTGAAGATCTCAAAATTACGACCAATGGATGCTATTGAAATTTATCGATACCTTCTTGCATTGGTTCAAGCCCAGAAAAAATCATCTGGGCATCTTAAACAAGGTATTATGTTCGAAGGTCGTGGAGAACATTTAGAAGCTATCATTGCTACCTTGAATGCAGTTCTATTTGAACCAAACTATGTGCCAAGCAAGATCTTGATGGCTTCCTTGATACTAAAAATCGGTTTTAATGTCGTTGCACCTGTTGCTAGATGCCTACTTACTGATGCACTTAGAATAGAACCCACCAATTGCATGGCTTGGTATTATCTGGGATTAACTCATAAGGCTGATGGTGGCTGTTGA 1497 0.3888 MFEVVYLKVKSLQKLDKCTEAINECKHVLDVFEKTFVQGTLDTQVDNKLQEIVSRVLELLPELWKQDGCYNEALAAYRNALLSQWNLDNEFCARIQKALAVFLLYSEVEASPPNKTDGSYVPKSNLEEAILLLMIILRNFVLGKIKWDPSVKEHLTFTLSTCGQTFILAKQFEELIPGIYHRIDRWNFLALCNSGAGEDKSALNLLRMSLHKHERPGDLISLLLAAKICSENPHLAAEGVGYAQRAINNAQGLDEHLKGVGLRMLGLCLGKQANVCSSDKDRGELQSEALNSLEKAIRLEQNNFDLIFELAIQHAMHQNLPTALFCAKQFFDKTGGSKLNGWRLLALILSAQKRFPEAELVTDATLDETAKWEQGPLLSLKAKLKISKLRPMDAIEIYRYLLALVQAQKKSSGHLKQGIMFEGRGEHLEAIIATLNAVLFEPNYVPSKILMASLILKIGFNVVAPVARCLLTDALRIEPTNCMAWYYLGLTHKADGGC* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02085 498 SUPERFAMILY TPR-like 284 489 IPR011990 GO:0005515
Lapu3g02085 498 Gene3D Tetratricopeptide repeat domain 2 444 IPR011990 GO:0005515
Lapu3g02085 498 SUPERFAMILY TPR-like 11 324 IPR011990 GO:0005515
Lapu3g02085 498 PANTHER PROTEIN NPG1 416 497 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02085 Lapu-Chr3 40370460 40373328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02085 1 496 Calmodulin-binding Proteins AT2G43040 58.770 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02085 K21843 - gmx:100811897 761.525