Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02084 ATGTTGGGACTTTGCCTAGGAAAACAAGCCAATGTTTGTTCTTCCGACAAAGATAGGGGTGAGCTTCAATCTGAAGCTCTAAATTCATTGGAGAAGGCAATTAGATTGGAGCAAAACAATTCTGATCTAATTTTTGAATTGGCTATTCAACATGCTATGCACCGAAATTTACCTACTGCTTTATTCTGTGCTAAACAGTTCTTTGATAAAACTGGTGGCTCTAAACTGAATGGTTGGAGATTGCTTGCTCTAATTTTGTCAGCACAAAAAAGATTTCCTGAGGCCGAACTTGTCACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAGGGGCCGCTACTCAGGTTGAAAGCCAAGTTGAAGATCTCCCAATTACGACCAATGGATGCTATTGAAATTTATCGATACCTTCTTGCATTGGTTCAAGCCCAGAAAAAATCATCTGGGCATCTTAAACAAGGTTCACAGGTTGAGGATGATAAAATAAATGAACTTGAAGTTTGGCATGGTCTAGCAAATTTATATGCAAGCCTTTCTCACTGGAAGGATGCTGAAATTTGTTTGCAAAAGGCTAAGGATTTAAAGGAATACTCACCAACAACGATACACACTGAAGGTATTATGTTCGAAGGTCGTGGAGAACATTTAGAAGCTATCATTGCTACCTTGAATGCAGTTCTATTTGAACCAACCTATGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTAAAAATCGGTTTTAATGCCGCTGCACCTGTTGCTAGATGCCTACTTACTGATGCACTTAGAATAGAACCCACCAATTGCATGGCTTGGTATTATCTGGGATTAACTCATAAGGCTGATGGTCGAATATCTGAGGCTGTTGATGCCTTCTACGCAGCTTCATTGCTTGAAGAATCTGATCCCATTGAAAGTTTCAGCTCTCTGATTTGA 942 0.4002 MLGLCLGKQANVCSSDKDRGELQSEALNSLEKAIRLEQNNSDLIFELAIQHAMHRNLPTALFCAKQFFDKTGGSKLNGWRLLALILSAQKRFPEAELVTDAALDETAKWEQGPLLRLKAKLKISQLRPMDAIEIYRYLLALVQAQKKSSGHLKQGSQVEDDKINELEVWHGLANLYASLSHWKDAEICLQKAKDLKEYSPTTIHTEGIMFEGRGEHLEAIIATLNAVLFEPTYVPSKILMASLILKIGFNAAAPVARCLLTDALRIEPTNCMAWYYLGLTHKADGRISEAVDAFYAASLLEESDPIESFSSLI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02084 313 Gene3D Tetratricopeptide repeat domain 251 310 IPR011990 GO:0005515
Lapu3g02084 313 SMART tpr_5 76 109 IPR019734 GO:0005515
Lapu3g02084 313 SMART tpr_5 166 199 IPR019734 GO:0005515
Lapu3g02084 313 SMART tpr_5 271 304 IPR019734 GO:0005515
Lapu3g02084 313 SMART tpr_5 200 233 IPR019734 GO:0005515
Lapu3g02084 313 SUPERFAMILY TPR-like 21 294 IPR011990 GO:0005515
Lapu3g02084 313 Gene3D Tetratricopeptide repeat domain 2 244 IPR011990 GO:0005515
Lapu3g02084 313 PANTHER PROTEIN NPG1 1 310 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02084 Lapu-Chr3 40361952 40366091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02084 1 313 Calmodulin-binding Proteins AT2G43040 62.857 3.40e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02084 K21843 - gmx:100811897 502.671