Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02083 ATGGAGTTTGAGAAGAACCAACGTGTGACGATTCGCGAGATTTGCGCGAATGGAAGTTGCATGAAAGCGACAGAACTTGAGGCCAAACTTGATGCAGGAAATGTCCAAGAAGCAGAAGCATCACTGCGTGATGGGTTGTCACTAAATTCTGAGGAAGCAAAGGCTCTTATTGGAAAATTAGAGTATCAAAGAGGTAACGTGAAAAATGCTCTTCAAGTGTATGAAGGGATTGATCTTCAACCAATCATACAACAATTACAAACTTCCCTTTCGGAAAAAACACCTGTGAAGAATACTTTGATGTTTGAAGTCGTCTATCTAAAAGTCAAGTCTCTACAAAAGTTGGACAAATGTACTGAAGCTATTAATGAGTGCAAGCGTGTTCTTGATGTTGTTGAGAAGACATTTGGTCAGGGTACACTTGATACACAAGTCGACAATAAATTGCAAGAGATAGTCAGTCGTGTACTGGAATTGCTTCCAGAGCTTTGGAAACAGGATGGTTGTTATAATGAGGCATTGGCTGCTTATAGGAATGCCCTACTTAGTCAATGGAATCTTGATAATGAATTTTGTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGTGAAGTTGAGGCAAGTCCACCTAACAAGACTGATGGGTCTTATGTACCCAAAAGCAATCTGGAAGAGGCAATTCTTCTTTTAATGATTATTTTGAGAAACTTCGTCCTGGGTAAGATAAAGTGGGATCCTTCAGTTATGGAACACCTCACTTTCACACTTTCAACATGTGGACAAACTTCTATTTTAGCAAAGCAATTTGAAGAGCTGATACCTGGTATATATCACCGTATTGATCGTTGGAATTTTTTAGCTTTGTGTAATAGTGGAGCTGGAGAAGATAAAAGTGCTTTAAATCTGCTTAGGATGTCTTTACATAAACATGAACGACCAGGTGACCTAATATCATTATTATTGGCTGCCAAAATTTGTAGTGAGAATCCTCATCTTGCCGGCGAGGAGTGGGTTATGCACAAAGAGCAATCAATAATGCCCAAGGATTAG 1059 0.3928 MEFEKNQRVTIREICANGSCMKATELEAKLDAGNVQEAEASLRDGLSLNSEEAKALIGKLEYQRGNVKNALQVYEGIDLQPIIQQLQTSLSEKTPVKNTLMFEVVYLKVKSLQKLDKCTEAINECKRVLDVVEKTFGQGTLDTQVDNKLQEIVSRVLELLPELWKQDGCYNEALAAYRNALLSQWNLDNEFCARIQKALAVFLLYSEVEASPPNKTDGSYVPKSNLEEAILLLMIILRNFVLGKIKWDPSVMEHLTFTLSTCGQTSILAKQFEELIPGIYHRIDRWNFLALCNSGAGEDKSALNLLRMSLHKHERPGDLISLLLAAKICSENPHLAGEEWVMHKEQSIMPKD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02083 352 Gene3D Tetratricopeptide repeat domain 22 337 IPR011990 GO:0005515
Lapu3g02083 352 PANTHER PROTEIN NPG1 5 338 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02083 Lapu-Chr3 40361952 40366091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02083 4 338 Calmodulin-binding Proteins AT2G43040 62.429 3.08e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02083 K21843 - gmx:100811897 525.783