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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lapu3g02072
ATGTACGAAGAAAGTAGTTGCTTTGATCCCAATGGGATGGTGGCAGAAGACTGTTTTTCCCAGATGGTTTCAAAATCAGAGGCAGTTATGTCTGTGACTAGCATACAGCCCCACAACACCTTTGGGATGGAAAACTTAGCCTACACATATTCCAGTGGAGAAGATGCTTCTGCTGTTGCTATGGAAATCATTGCACACCCCCAACAGAACTCATACAATCAAGACAATAACTTGAACCCCCAGTTTGTGCAAGTGGTGAACAACCATGGTTCATGTGAGGAGCTTTATTCTTTCCCCCCTCACTCCTCCACACTTGAGAGGGGTCACCATGATCACCAATTTCCTTACTCCACACCAACACCAGATCTCCTCAACCTTCTCCACTTGCCAATGACCTTTGAAAACCAAAGCAGCAATCTTCCGAAACCCTCTGGCCCAATGGGAACAGCAGACAGCACAAACGTCTCCTCTGTTTCCTATGACCCTTTCTTGCATCTCAACCTGCAAGCACCTCCCCCAGCTATCAGAAATGATTTTGCCTTTGGAGGAGGGGGTGCCATAGAAGGCAGTGGAATTGCCTACCAAGATTTTGGAAATGGGGTTGTGGAGTTCACTCAAGATGTTGGGAAAAAGAGAGGGGGCAAAAGGACCAAGCAGTTTACCAGTACCACCACTGAGAGACAAAGGAGAGTGGATTTGAGTAGTAAATTTGATGCTTTGAAAGAACTCATCCCAAACCCCTCCAAGAGTGATAGAGCATCCGTGGTGGGAGATGCTATTAACTATATCAGAGAGCTGAAGAGGACAGTGGACGAACTAAAATTACTGGTGGAGAAGAAAAGGCACGAGAAACAAAGGGTAGTAGTGATGATGAGGCAAAAGGTTGAAAATGAAGGGCAAGGTGACTCCAATCTCGACCCAGATGATGGTTCCTACAATGAAAGCTTAAGAAGTTCTTGGATACAAAGGAAATCCAAAGACACAGAGGTTGATGTGCGCATTGTTGACAATGAGGTAACAATCAAGCTTGTTCAAAGGAAGAAGATGGATTGCTTGGTGCATGTCTCACAGGTTCTTGATCAACTCAACCTCGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTATCTGTTCAATACCAAGATGTGTGACGGTTCTTGTGTTTATGCAAGCGCTATAGCCAACAAGCTCATTCAGGTCATGGACACAAGTTTGGCAGCAGTGTGA
1239
0.4552
MYEESSCFDPNGMVAEDCFSQMVSKSEAVMSVTSIQPHNTFGMENLAYTYSSGEDASAVAMEIIAHPQQNSYNQDNNLNPQFVQVVNNHGSCEELYSFPPHSSTLERGHHDHQFPYSTPTPDLLNLLHLPMTFENQSSNLPKPSGPMGTADSTNVSSVSYDPFLHLNLQAPPPAIRNDFAFGGGGAIEGSGIAYQDFGNGVVEFTQDVGKKRGGKRTKQFTSTTTERQRRVDLSSKFDALKELIPNPSKSDRASVVGDAINYIRELKRTVDELKLLVEKKRHEKQRVVVMMRQKVENEGQGDSNLDPDDGSYNESLRSSWIQRKSKDTEVDVRIVDNEVTIKLVQRKKMDCLVHVSQVLDQLNLDLQHVAGGHIGDFCSYLFNTKMCDGSCVYASAIANKLIQVMDTSLAAV*
413
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lapu3g02072
412
PANTHER
TRANSCRIPTION FACTOR BHLH91
1
411
IPR045895
GO:0006355|GO:0048658
Lapu3g02072
412
Coils
Coil
263
283
-
-
Lapu3g02072
412
CDD
bHLH_AtMYC1_like
224
282
IPR045896
-
Lapu3g02072
412
Pfam
Helix-loop-helix DNA-binding domain
225
266
IPR011598
GO:0046983
Lapu3g02072
412
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
215
286
IPR036638
GO:0046983
Lapu3g02072
412
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
217
266
IPR011598
GO:0046983
Lapu3g02072
412
Gene3D
-
209
297
IPR036638
GO:0046983
Lapu3g02072
412
SMART
finulus
223
272
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lapu3g02072
Lapu-Chr3
40120061
40121969
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lapu3g02072
1
411
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT2G31210
41.099
1.76e-83
260
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Lapu3g02072
HLH
4.5e-08
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lapu3g02072
-
-
vra:106767981
778.089
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