Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02063 ATGGCTCGTTCTGTGCCTTTGGTCTCAACCATCTTTGTATTACTTCTGCTTCTGGTGGCCACTGAGATGGGGCCAACAATGGTGGCAGAGGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGTGTGAGTAACACCAACTGTGCTTCTGTTTGTCGAACTGAACGTTTCACTGGAGGGCATTGCCGTGGCTTGCGTCGTAGATGCTTCTGCACCAAACATTGTTAA 237 0.4979 MARSVPLVSTIFVLLLLLVATEMGPTMVAEARTCESQSHRFKGPCVSNTNCASVCRTERFTGGHCRGLRRRCFCTKHC* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02063 78 PANTHER DEFENSIN-LIKE PROTEIN 1 8 78 - -
Lapu3g02063 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Lapu3g02063 78 CDD Knot1 43 75 IPR003614 GO:0006952
Lapu3g02063 78 Gene3D - 32 78 IPR036574 -
Lapu3g02063 78 Pfam Gamma-thionin family 32 78 - -
Lapu3g02063 78 SMART gth_4 33 78 IPR003614 GO:0006952
Lapu3g02063 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Lapu3g02063 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Lapu3g02063 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02063 Lapu-Chr3 39963034 39963652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02063 1 78 Plant Defensins Gene Families AT2G02100 62.821 4.89e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02063 - - gmx:547843 139.813