Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02044 ATGTCTTCGGCGGATTACGACACGGGACCGGTCGCGCCGCCGTACAACACCCCGCCGGCGCTAATCGCCTTCACGCTGGGTGTGCTTGTGGTGTGCTTCGTGGCGTTCAGCATCGTGTACTTGTGCAAATACTGTTTCTCCAGCGTCATCCAGACCTGGGCCTTTCAACGCACCGCTTCGGGTTCCCTCATTCGTCTCACGCCCCATAGATCTCCCCCGAGAGGCCTTGACCCTTCGTTGCTACAGGTGTTCCCGACGTTCCTTTACTCCTCCGTGAAGGACCTCCGCAAGGATCACAAGTATAGCTTAGAATGCGCCATCTGTTTGGTGGAGTTTGAGGACGATAGCATGCTTCGCCTCTTGACCCTCTGCTGCCATGTCTTCCACCAAGACTGCATCGACCTCTGGCTCTGCTCCCACAAAACCTGCCCCGTTTGTCGCCGAGACCTTGACTCTCCCCCCGACCAAACTCTCAAACCCGGCGACGTCGTTGTTTCCTCTTCCAGCGGTGAGATACGCATTGATGTAAGAGAAGAAGAAGCTCTTGATTGTGGACATGAACATGCTTGTGATGGCACCCAAATACACGAAGAACAACAACAACCTCAACAACATGAACATGGACGTGGAAATGAAGCTAAAGGTGGACCTGTGCATGAGGTGGTTGATGAACATGAGGAACAAATGTTTGTACGGTCTCATTCAACGGGGCACTCCATAGTTATGATTAGAGGGGATGGGGCTGATGAGGGAAAGGATGATGAAAGGTACACATTGAGATTGCCGGAGCATGTTTTGAGAGTGAGGCATAATAACAAGCATAATTGCACCAGGAGCTGTGCCAGTTTTAAGGACATCACCAAGCTTGATGCTCCTGCACCTTGTAGTAATTGTGGCTTTGTTCAACCCCAATCACCCACTTGCTCCTCCTCCCCAACCCATACTCGTAAATCTTGA 957 0.5183 MSSADYDTGPVAPPYNTPPALIAFTLGVLVVCFVAFSIVYLCKYCFSSVIQTWAFQRTASGSLIRLTPHRSPPRGLDPSLLQVFPTFLYSSVKDLRKDHKYSLECAICLVEFEDDSMLRLLTLCCHVFHQDCIDLWLCSHKTCPVCRRDLDSPPDQTLKPGDVVVSSSSGEIRIDVREEEALDCGHEHACDGTQIHEEQQQPQQHEHGRGNEAKGGPVHEVVDEHEEQMFVRSHSTGHSIVMIRGDGADEGKDDERYTLRLPEHVLRVRHNNKHNCTRSCASFKDITKLDAPAPCSNCGFVQPQSPTCSSSPTHTRKS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02044 318 MobiDBLite consensus disorder prediction 196 216 - -
Lapu3g02044 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 153 IPR013083 -
Lapu3g02044 318 SMART ring_2 105 146 IPR001841 -
Lapu3g02044 318 Pfam Ring finger domain 104 147 IPR001841 -
Lapu3g02044 318 SUPERFAMILY RING/U-box 97 153 - -
Lapu3g02044 318 FunFam E3 ubiquitin-protein ligase ATL6 65 153 - -
Lapu3g02044 318 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Lapu3g02044 318 PANTHER RING FINGER DOMAIN-CONTAINING 19 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02044 Lapu-Chr3 39464914 39465870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02044 19 267 Rapid Response to Elicitors AT2G35000 34.363 3.74e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02044 - - vum:124822565 536.184