Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02039 ATGGGTTCTGGAGGCCCTGATGACGAGGACAACCGGTGGCCACCATGGCTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTTACCACAAAGATCACCGTGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATAAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTCTTCTTGAATGAGAGGCCTCAACCTAGGCCTGGTAAAGGAGTCACCAACACCTGCGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGATTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTCGGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGACTCAGAGGATTCATACAGCAGCAATAGCAGCCATGGGAAGAACAACAGCAACAAGGTGCAGAGTTTCACACCGTCCACCCCACCACCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 648 0.4923 MGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNSEKKKKSATMASDSEDSYSSNSSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02039 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lapu3g02039 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 208 - -
Lapu3g02039 215 MobiDBLite consensus disorder prediction 149 215 - -
Lapu3g02039 215 MobiDBLite consensus disorder prediction 158 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02039 Lapu-Chr3 39332276 39334050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lapu3g02039 PLATZ 5.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02039 - - vra:106774881 425.631