Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02020 GTTAACCTGCAGAGTTGTGTGGCTGATTTCGGCTTTCCTTCATTTTTGTCCCCAAGTGTAAAGAGACTAATTAGGAGAACCCTTGATCCCAATCCTGCTACACGGATTACAGTTGCTGATATCTTGAAGGATGAATGGTTCAATAGTAATAATGGGGACCAACCTACTATGTCTTCTCAGGAAGCTGTTAGTTCTAACACTGGGCAAGATGCGGGACCTTCAACTCATGAAATCAAGAATTCATACGATGATTTGCGTATCACTCCCCTCTTCAAATGTGAAGCAGTAAAGCGATTCATAAATATAAAATTGGATCTCTTTTCCATCATTAAATATTATACACTTAATGTATTTAGTTTAGTAGTCACCAAAATGATCAGATTTAGATGTAAATCTCTAATTCAAAATTTTCTTTTGACACCATTATGA 429 0.3636 VNLQSCVADFGFPSFLSPSVKRLIRRTLDPNPATRITVADILKDEWFNSNNGDQPTMSSQEAVSSNTGQDAGPSTHEIKNSYDDLRITPLFKCEAVKRFINIKLDLFSIIKYYTLNVFSLVVTKMIRFRCKSLIQNFLLTPL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02020 142 Gene3D Transferase(Phosphotransferase) domain 1 2 111 - -
Lapu3g02020 142 MobiDBLite consensus disorder prediction 52 74 - -
Lapu3g02020 142 SUPERFAMILY Protein kinase-like (PK-like) 9 55 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02020 Lapu-Chr3 38789554 38791033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02020 6 50 CBL-interacting serine-threonine protein kinases AT1G01140 48.889 2.86e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02020 - K07198 pvu:PHAVU_002G179600g 128.257