Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02009 ATGGCTTTCTTCACCTCTTCTTCGTCCTCTAATCAAGCCCAAAACCAAACCTCTTTCTTCGTGTGTATCATCATCATCTTCTTCTTCACTTCGTTCCATAACACTGTAGAATCCGTTTCTTTCAACTTTTCCAACTTCCAGCAGTCAAGCTTGAACAACCTAATAAACTTCACGGGTGATGCCTTTCCCTCAAACGGAGTTCTTCAGCTCACGAGGAACCAACTCGATGGCCCCATCACAAGCAGCGTTGGTCGAGTCTCGTATGAACAACCAGTGAGGCTTTGGGATCAAAGAACAAAGAGGCTCACCGATTTCACAACCCATTTCTCTTTCGTCATGAAAGCTGTGAACCAGTCTCGAGTTGGTGATGGCTTAGCCTTCTTCCTTGCACCCTTTGATTCTTCCATTCCCAACAATTCCTCTGGTGGTTACCTTGGCCTGTTCAGCAAGGATTCCGCATTCGACACTAAGAAAAATCAGCTAGTGGCAGTTGAGTTCGACAGTTTCAAGAACGAATGGGATCCGAGCTCAGATCACGTAGGGATCAATGTCAATTCCATTCAATCAGTTGCAAACGTCACTTGGAAGAGCAACATTAAGAACGGGTCTGTTGCTAATGCTTGGATATGGTACAACTCCACATCCAAAAATCTCTCTGTCTTCCTTACTTATGCTGATAATCCAACCTTCAACGGCAGTTCTAGTCTTTCTTACGTTATTGATTTGAGGGACGTGTTGCCAGAGTTTGTTAGAATAGGCTTTTCTGCAGCAACGGGTCAATGGGTTGAGATACACAACATTTTGCTTTGGTCATTCAGTTCAACCTTGGATGGGGATGGTAGGAAAAAGGCCAAGGTTGGCTTAGTGGTTGGTATAAGTGTTGGTTTGGGTTGTTTAGCTTGTGTTGTAGGTCTATTATGGTTTACCTTTTGGAGAAGGAGAAATAGATTAAGGGGTGTAAACGAGGACAAAATTGGTGTTGATGCTTCTATAGATGATGAGTTTGAGAGAGGGACTGGTCCAAAGAGGTTCACCTACCGGGAACTAAGCAACGCAACCAACAACTTTGCTGAAGAAGGGAAACTAGGAGAAGGAGGGTTTGGAGGTGTTTACAAAGGTTCGATTGAAAATTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCAAAAGGGTCAAAGCAAGGGAAAAAGGAGTACATATCAGAAGTGAGAGTTATCAGCCGGCTGAGACATAGAAACTTGGTTCAACTCGTAGGGTGGTGCCATGAACAAGGTGAACTCCTTCTTGTTTATGAATTCATGCCTAATGGGAGCCTCGATTCTCATCTATTTGGAAATAGAGTGATGCTTTCGTGGGTGGTGAGATACAAGGTGGCCTTAGGTTTGGCATCTGCCCTTCTTTACCTTCATGAAGAGTGGGAACAGTGTGTGGTGCATAGAGATATTAAGTCAAGTAATGTAATGTTGGATGCGAATTTCAATGCCAAGCTTGGTGACTTTGGTCTTGCAAGGCTGGTAGACCATGAACTAGGTTCACAAACCACTGTTTTGGCAGGCACCATGGGGTACCTAGCCCCAGAGTGTGTGACCACAGGGAAATCAAGCAAGGAATCTGATGTGTACAGCTTTGGAGTTGTGGCACTTGAGATCACATGTGGTAGAAAACCAGTGGAGGTGAAAGAAGAGCCTGCTAAAGTAAGGCTTGTGGAGTGGGTCTGGAACCTCTATGGAAAAGGGAAACTACTAGAAGCAGCTGATGAGAAATTGAATTGGGAATTTGAAGAACAGCAAATGGAATGCTTGATGGTTGTGGGGTTGTGGTGTTGTCACCCTGATCATACCATGAGACCCTCCATTAGGCAAGTAATAAGTGTTCTTAATTTTGAAGCCCCCTTGCCAAGTCTTCCATCCATGTTGCCAGTGCCAATGTACTTTGCACCTCCCATGGAGATGAGCAAATTCTCCTACACTTCATCTGCTGCTACAACCACAACCAAAGAATCGTCCCCTTACTCGTCAACGTCCACAGCCTCCGGAAAGTCTCCATTATTATACCAATAA 2058 0.4461 MAFFTSSSSSNQAQNQTSFFVCIIIIFFFTSFHNTVESVSFNFSNFQQSSLNNLINFTGDAFPSNGVLQLTRNQLDGPITSSVGRVSYEQPVRLWDQRTKRLTDFTTHFSFVMKAVNQSRVGDGLAFFLAPFDSSIPNNSSGGYLGLFSKDSAFDTKKNQLVAVEFDSFKNEWDPSSDHVGINVNSIQSVANVTWKSNIKNGSVANAWIWYNSTSKNLSVFLTYADNPTFNGSSSLSYVIDLRDVLPEFVRIGFSAATGQWVEIHNILLWSFSSTLDGDGRKKAKVGLVVGISVGLGCLACVVGLLWFTFWRRRNRLRGVNEDKIGVDASIDDEFERGTGPKRFTYRELSNATNNFAEEGKLGEGGFGGVYKGSIENSNLEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLVGWCHEQGELLLVYEFMPNGSLDSHLFGNRVMLSWVVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRKPVEVKEEPAKVRLVEWVWNLYGKGKLLEAADEKLNWEFEEQQMECLMVVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSMLPVPMYFAPPMEMSKFSYTSSAATTTTKESSPYSSTSTASGKSPLLYQ* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02009 685 MobiDBLite consensus disorder prediction 661 685 - -
Lapu3g02009 685 FunFam L-type lectin-domain containing receptor kinase IX.1 37 285 - -
Lapu3g02009 685 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02009 685 Pfam Legume lectin domain 39 277 IPR001220 GO:0030246
Lapu3g02009 685 CDD STKc_IRAK 370 626 - -
Lapu3g02009 685 CDD lectin_legume_LecRK_Arcelin_ConA 39 276 IPR001220 GO:0030246
Lapu3g02009 685 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Lapu3g02009 685 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02009 685 ProSitePatterns Legume lectins alpha-chain signature. 246 255 IPR000985 -
Lapu3g02009 685 FunFam Lectin-domain containing receptor kinase A4.3 433 645 - -
Lapu3g02009 685 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Lapu3g02009 685 FunFam L-type lectin-domain containing receptor kinase IX.1 341 432 - -
Lapu3g02009 685 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
Lapu3g02009 685 Gene3D - 36 289 - -
Lapu3g02009 685 PANTHER - 53 635 - -
Lapu3g02009 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Lapu3g02009 685 SUPERFAMILY Protein kinase-like (PK-like) 340 654 IPR011009 -
Lapu3g02009 685 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02009 685 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Lapu3g02009 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 276 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02009 Lapu-Chr3 38572818 38574944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02009 24 643 Receptor kinase-like Gene Family AT5G10530 51.800 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu3g02009 Pkinase 9.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02009 - - pvu:PHAVU_003G287100g 1178.31