Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01987 ATGGCCGGTGCCACAAACTGGCTTACGTTTTCTTTGACTCCCATGGAAATTATCAGATCCCCCGATTCTTCATCTCACTGCATTCTCGATAACTTTTATGCCACCAATGGGTGGACAAATTCCAAAGGATTGATGGACTCTGAGGGTGAAAATCAGCCACTTGTGGTGCCAAAAGTGGAAGACTTTTTTGAAAACCAAATGGAGACTCAACAAGCCGATTCTTCACTGACCCAAAATTACGAACATGGTTCTGCTTCTGTTTACTTTGGTGACCAGCAAGATCTGAAGGCTGTTCCCGAGTTTAAAGCATTCTCTGCAACCAACTCGGGCTCCGAGTTGAATGACTCAGTCTCGGGCAAGACCACACGGGTTGCACCCGCTGAGTTAGCTGCTCACTCTGGCGTCTCTTGCAAAGGAGCTTTGTCTTTACGTGATGTTGTTGCAGATGAGAAGGACATAATTTCTGTGGAGTTTGATTCATCGAAGAAGGTTGCTCATACCATTAGTCAGCGAACTTCAATATACAGAGGGGTCACCAGACACAGATGGACGGGTAGATATGAAGCGCATCTATGGGATAACAGCTGTAGACGAGAGGGT 600 0.4633 MAGATNWLTFSLTPMEIIRSPDSSSHCILDNFYATNGWTNSKGLMDSEGENQPLVVPKVEDFFENQMETQQADSSLTQNYEHGSASVYFGDQQDLKAVPEFKAFSATNSGSELNDSVSGKTTRVAPAELAAHSGVSCKGALSLRDVVADEKDIISVEFDSSKKVAHTISQRTSIYRGVTRHRWTGRYEAHLWDNSCRREG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01987 200 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 53 200 - -
Lapu3g01987 200 Gene3D AP2/ERF domain 174 199 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01987 Lapu-Chr3 37600340 37601836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01987 44 200 AP2-EREBP Transcription Factor Family AT5G10510 35.780 3.61e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01987 K09285 - gmx:100814405 207.608